Pairwise Alignments

Query, 325 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 366 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  117 bits (293), Expect = 4e-31
 Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 7/205 (3%)

Query: 122 KGDKATVELPDGTNVVLNSASQLSYLNNFGEK-VRRVQLNGEAYFKVAPDEKHAFIVQVG 180
           +G+   V LPD + V +N+AS L+Y  N  +  +R V+LNGEAYF+VA D+ H F+V+  
Sbjct: 167 RGETYMVILPDKSKVWMNAASSLTYTTNLLKNGIRSVKLNGEAYFEVAKDKLHPFVVETK 226

Query: 181 DLEVKVLGTSFNVSAYEDAKDITVVLLEGKVGIYTQETSRMMKPGDKIEYNKTTHQLVAT 240
           + +VKVLGT FN++AY+D   +   LLEG V I     S ++KP  +       H++   
Sbjct: 227 NQQVKVLGTHFNINAYDDEHVVKTTLLEGSVEI---NKSVILKPNQQAIL--LNHEIKVI 281

Query: 241 QVHPNDYIEWTKGNIYFEKESLENIMKTLSRIYDVEIRFDSNKLPKEYFTGTIP-SGGIQ 299
            V  + +I+W +G   FE + +  IM+ ++R YDV+I +   +  K+ F+G +  S  IQ
Sbjct: 282 PVIADSFIDWQQGVFIFENDDMHAIMRKIARWYDVQIAYHIAEDNKQTFSGYMSRSSDIQ 341

Query: 300 NALNILMLTSPFYYEMDGSVIVLKE 324
             L  L   S   +++    I + +
Sbjct: 342 KVLQNLSEISNLKFKIKDRTITVSQ 366