Pairwise Alignments

Query, 325 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 386 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  115 bits (287), Expect = 2e-30
 Identities = 70/219 (31%), Positives = 121/219 (55%), Gaps = 6/219 (2%)

Query: 105 LIDSSQMTSAPFIVKADKGDKATVELPDGTNVVLNSASQLSYLNNFGEKVRRVQLNGEAY 164
           L  ++ +TS    +   K    TV LPDG+ V+LN+ SQL +  +F EK R+V+L GEAY
Sbjct: 172 LATTASLTSRYNTLVVPKAGTYTVTLPDGSKVMLNAMSQLKFPVSFTEKERKVELKGEAY 231

Query: 165 FKVAPDEKHAFIVQVGDLEVKVLGTSFNVSAYEDAKDITVVLLEGKVGIYTQETSRMMKP 224
           F+VA D  H F V++ + EV+VLGT FN+S+Y+ A   T  LLEG V +   ++S ++ P
Sbjct: 232 FEVAKDAAHPFKVKLDESEVEVLGTHFNISSYDQAAKTT--LLEGSVKVSNGKSSGILVP 289

Query: 225 GDKIEYNKTTHQLVATQVHPNDYIEWTKGNIYFEKESLENIMKTLSRIYDVEIRFDSNKL 284
           G +   + T+  L  ++ +    + W K + YF  + +   +  +SR YD+++ +    L
Sbjct: 290 GKQALADLTS--LTVSKGNTEKAVAWCKDDFYFSNDEIGPALTEISRWYDLKLVY-KKTL 346

Query: 285 PKEYFTGTIP-SGGIQNALNILMLTSPFYYEMDGSVIVL 322
           P  + +G I     +   +N+L   S   + ++   +++
Sbjct: 347 PNIHISGHISRKAKLSEVVNMLKEVSDLSFSIENRNLII 385