Pairwise Alignments

Query, 325 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 384 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  136 bits (343), Expect = 7e-37
 Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 4/207 (1%)

Query: 118 VKADKGDKATVELPDGTNVVLNSASQLSYLNNFGE-KVRRVQLNGEAYFKVAPDEKHAFI 176
           ++  +G +  V LPDGT+V LNS+S L Y  +F   K RRV+L GEAYF+VA D+K  F+
Sbjct: 178 IETPRGGQYQVLLPDGTHVWLNSSSSLKYPASFASMKTRRVELKGEAYFEVARDKKIPFL 237

Query: 177 VQVGD-LEVKVLGTSFNVSAYEDAKDITVVLLEGKVGIYTQETSRMMKPGDKIEYNKTTH 235
           V++ D  EV VLGT FN+ A++D   I   L+EG V I     + ++KPG++ E      
Sbjct: 238 VRINDRAEVLVLGTHFNIMAFDDEPVIKTTLIEGSVKIANNNFNNLLKPGEQAELT-DAG 296

Query: 236 QLVATQVHPNDYIEWTKGNIYFEKESLENIMKTLSRIYDVEIRFDSNKLPKEYFTGTIPS 295
           Q+V  QV  N+ I W  G   F  + L++IM+ +SR YD+++ +    +PK  FTG I  
Sbjct: 297 QIVINQVDVNESIAWKNGQTLFVDQDLKSIMRQVSRWYDLDVEY-RGVIPKRLFTGGISR 355

Query: 296 GGIQNALNILMLTSPFYYEMDGSVIVL 322
               +AL  ++  S   ++M+G  I++
Sbjct: 356 EANLSALLKILELSHINFKMEGRKIIV 382