Pairwise Alignments

Query, 341 a.a., chloromuconate cycloisomerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 365 a.a., dipeptide epimerase from Rhodanobacter denitrificans MT42

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 13/172 (7%)

Query: 134 NRMLAQIEKKMEAGFRCIKLKIGAINFEEELAL-LQHIRSHYSSKEIE--LRVDANGAFS 190
           ++M+A     +E GF  +K+K+G     +++ + ++ +++ Y++ E    LR+DAN  ++
Sbjct: 142 DKMVADSVSAVERGFESLKIKVG-----KDIGVDIERVKAIYAAVEGRALLRLDANQGWT 196

Query: 191 PTDAMEKLKRLSE--LDLHSIEQPIRAGQWEEMARLTSESPLPIALDEELIGYNTWEEKQ 248
              A+  L+ L E  + L  IEQP++A     M  +T     P+  DE + G     E  
Sbjct: 197 AKQAVYALQTLEEAGIKLELIEQPVKARDLAGMRYVTERVHTPVMADESVFGPMEVIELI 256

Query: 249 RLLSAIRPQYIIIKPSLHGGLAGGEEWIAEAEKLNIGWWITSALESNIGLNA 300
           RL +A     I IK    GG++        A    I   I   LE++I + A
Sbjct: 257 RLRAA---DIINIKLMKTGGISNAVRIADIAAMHGIECMIGCMLETSISVAA 305