Pairwise Alignments

Query, 416 a.a., outer membrane efflux protein precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 423 a.a., membrane protein from Cupriavidus basilensis FW507-4G11

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 74/404 (18%), Positives = 156/404 (38%), Gaps = 17/404 (4%)

Query: 15  MVEAVLIPAFAQMPEIKLGQSISFEEYLNRVAKKNLSYLAEKLNVSIADAEVIARKIFPD 74
           M   V + +   +P +   ++ +  + L+     N    A +  V  A A V + + +P+
Sbjct: 1   MFSMVALLSLGALPALA-AETFTLPQLLSLSQSTNKGVEAAQAGVDAASAAVTSARAYPN 59

Query: 75  PELEFE-----------AGNETFSLGVSYSLEMGNKRGARIKLARTQAELEKLVLQQGFQ 123
           P++E              G    ++ ++  L+   +R  R ++A    E  +   Q    
Sbjct: 60  PQVEVMYGRLSPRTSGVTGGAAPTMAITQKLDYPQQRKLRAEIAGRSLEATEAGRQAFRA 119

Query: 124 DLRAEAADLFLEAILQRELLEVQKSSYEYMYQLSQSDSLRYVSGEITENDVRQSKLETVT 183
           DL A     + + + +   L   K     M Q+     LR   GE    ++ +++ E ++
Sbjct: 120 DLAARVKTSYFDVLRREMELAAAKEDLAMMRQIQDRARLRVEVGEAPRYELIKAETELLS 179

Query: 184 LLNTVYSQEAAYHSALVLLNKHMGMSADTLHIPLGNWEELSRDFALSDLVKAGLDNRIDL 243
              T+ S +   + A   L + +G +    +   G+  +     AL  L         +L
Sbjct: 180 AQKTLQSAQLRVNQAKAALRQQVGGAMPAAYSLSGSLSQPPALPALPTLRDTLTGANAEL 239

Query: 244 LVAQKSTEVTTREYKLTRAERRPDIGVSVSYERNWNGFLPPSRSATAGVSVPLTFSNINK 303
              +   +  +      R+ R P++ V  S ER      P +  +  G+ + +   +   
Sbjct: 240 TQRRLEADRASLAVDYQRSLRLPELAVRASAERQ-----PDNTVSQVGLVLTIPLWDRRS 294

Query: 304 GAVKAAKFRIAQSEIMERDMELQIQTEITQAWFNYEAEKKKIAQYKAGVLEDSQKVLDGM 363
           G V  A  +  Q+       E ++  E+  A+  YE  + +++  + G++  ++  L   
Sbjct: 295 GPVGEAAAQAIQARTALEAREFELTQELESAYRQYEITQSQVSALEGGIVRQAESALAVA 354

Query: 364 VYKYKRGETSILDVLVAQRTYNEVQQEYLETMKGYAASLVALER 407
              Y+ GE  ILD L AQR     + + +       A+ + +E+
Sbjct: 355 ESAYRFGERGILDYLDAQRVLRGARSDLIAAQFELQAATIQIEK 398