Pairwise Alignments

Query, 416 a.a., outer membrane efflux protein precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 457 a.a., transporter from Cupriavidus basilensis FW507-4G11

 Score =  139 bits (351), Expect = 1e-37
 Identities = 107/408 (26%), Positives = 195/408 (47%), Gaps = 36/408 (8%)

Query: 36  ISFEEYLNRVAKKNLSYLAEKLNVSIADAEVIARKIFPDPELEFEAGN------------ 83
           + F  +L+ V ++N+   A++  +  A AE+    + PDP L++  G+            
Sbjct: 50  VRFSSFLDTVERQNIGLSAQQETIRGAQAEISIAGVRPDPVLKYGRGSIETSRAVSPKPP 109

Query: 84  ETFSLGVSYSLEMGNKRGARIKLARTQAELEKLVLQQGFQDLRAEAADLFLEAILQRELL 143
            T    +   +E+G KRGARI+ A +   L +  LQ   + L  E+A  F+EA   RE L
Sbjct: 110 RTHEFEIEIPIELGGKRGARIRAAESNLRLTEANLQGFKRTLYQESATAFVEACRSREAL 169

Query: 144 EVQKSSYEYMYQLSQSDSLRYVSGEITENDVRQSKLETVTLLNTVYSQEAAYHSALVLLN 203
             Q+S+   +  + +++ +R  +G+I   ++ QS++E       V S  AA  +A+  L+
Sbjct: 170 ARQESTLSALSNVVRANEIRRKAGDIGGLELSQSRVERDRFTAEVRSARAAAQAAMQQLS 229

Query: 204 KHMGMSADTLHIPLGNWEELSRDFALSD-------LVKAGLDNRIDLLVAQKSTEVTTRE 256
             +G+         GN   L+ +F   D       L+   ++ R ++ +A+ + +    +
Sbjct: 230 VQLGVRVAEA---FGN-APLACEFQPYDPGTDSGALIAQAMEARDEVRIARATLDNARDK 285

Query: 257 YKLTRAERRPDIGVSVSY------------ERNWNGFLPP-SRSATAGVSVPLTFSNINK 303
             L RA R  D  VS +             E   NG     SR     VS+PL  S + +
Sbjct: 286 SGLARANRWVDPSVSFAMTMTPGVRGTTDDEGQPNGDATARSRMLGVSVSIPLPLSRLQR 345

Query: 304 GAVKAAKFRIAQSEIMERDMELQIQTEITQAWFNYEAEKKKIAQYKAGVLEDSQKVLDGM 363
           G +  A+  + Q+ +  R+ EL+ + ++  A   ++A +  + +Y+  V+ D+ +VLDGM
Sbjct: 346 GELIQAESEVTQAMLALREAELKTEVDVRNALTAFQAAQDNLQRYRDAVIADADRVLDGM 405

Query: 364 VYKYKRGETSILDVLVAQRTYNEVQQEYLETMKGYAASLVALERACGI 411
              Y++G  S+L++L AQRT +E    YL+     A + V L+ + G+
Sbjct: 406 RQSYRQGAASLLELLDAQRTADETYLNYLQAQADLAGATVELQLSTGL 453