Pairwise Alignments

Query, 353 a.a., arabinogalactan endo-1,4-beta-galactosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 897 a.a., glycosyl hydrolase family 53 Endogalactanase galactan metabolism from Bifidobacterium breve UCC2003

 Score =  138 bits (347), Expect = 6e-37
 Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 28/304 (9%)

Query: 4   ASILSIVALIASMATNGCSEDGPVTNPRQEEPQKVVKEEGFARGADVSWLTQMEAEGLKF 63
           +S+ +I+     M T   +E+ PV      +  + + ++ F  G DVS +  +E  G+ F
Sbjct: 13  SSVAAIMLCAGGMFTANAAEEEPVKAAVSVKAIQGLSDD-FIGGMDVSSMLSLEESGVTF 71

Query: 64  YTPDENRQEMECMDLLRDYCGVNSIRLRVWVNP--KDGWN------NMNDVIVKAKRAER 115
              ++   E+E +  L    GVN +RLRVW +P   DG        N +  +  AKRA  
Sbjct: 72  KNAND---EVEDLFTLLKESGVNYVRLRVWNDPFTADGQGYGGGNVNADRALTMAKRATA 128

Query: 116 LGLRTMIDFHFSDTWADPGHQEMPEAWKELSFDDLKIA--LSEHVKSVLTALKAVGVTPE 173
            GL+ ++DFH+SD WADP  Q++P+AWK    D  K A  + ++ K  LT  K  GV   
Sbjct: 129 AGLKVLVDFHYSDFWADPSKQQVPKAWKSFEGDVDKTADTIYDYTKQTLTTFKQAGVDVG 188

Query: 174 WVQVGNETTPGMMLPVGSVDNPEQLTALNNAGYDAVKAICPDAKVIVHLDAGNDQWVYNR 233
            VQVGNETT      +  +   + ++ + +AG  A++ + P+AKV++H         Y  
Sbjct: 189 MVQVGNETT----AKIAGISGWDGMSKVFSAGSKAIREVLPEAKVVIHFTNPEKAGTYAT 244

Query: 234 MFDILQANGGKYDMIGMSLYPYWAEQEGKTGGWLKVADDCIANIKHVKQKYNKPVMICEI 293
               L  +   YD+   S YP+W    G T       ++  + +K+V   Y K VM+ E 
Sbjct: 245 YAKQLSNHNVDYDVFASSYYPFW---HGTT-------ENLTSVLKNVASTYKKDVMVAET 294

Query: 294 GMPY 297
              Y
Sbjct: 295 SWAY 298