Pairwise Alignments

Query, 1353 a.a., two-component system sensor histidine kinase/response (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1346 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  797 bits (2058), Expect = 0.0
 Identities = 467/1356 (34%), Positives = 743/1356 (54%), Gaps = 62/1356 (4%)

Query: 27   EQITFSYISINEGLSQSTVFSIDQDKRGNMWFATYDGVNKYDGYAFTVYQHNEDDPNSIA 86
            +QI F + ++ +GLSQ++V +I QDK G MWF T  G+N+YDGY F +Y++        A
Sbjct: 17   QQIYFDHFNVEKGLSQNSVLTIIQDKEGFMWFGTQYGLNRYDGYRFKIYRNTGLKNAISA 76

Query: 87   NDISRIVKTDSQGRVWIGTRDGLSRYDEEKDIFQNFFYEKN----GKHLQVNGIEEISPE 142
            N+I+ +   D +  +W+ T +GL++Y+ EKD F+      +    G H+ +  I E S  
Sbjct: 77   NEINYLFN-DREQNLWVATSNGLNKYNPEKDAFEKIVINSSKNWPGSHV-ITCIYEDSKS 134

Query: 143  QLLISTPEGLIMF----DIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGTST------ 192
             L I +  GL         K   F+    +      I +       +I++GT+       
Sbjct: 135  NLWIGSINGLTKMIKNPPYKSELFLKSGLNGLASNEIKAISEDDSGKIWVGTTKGLTVID 194

Query: 193  --DGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNY 250
              +G Y +   Q   +     L    I  I+     R+WV T+  G    N KT    NY
Sbjct: 195  KINGHYAFKTYQADGKP--GSLADNYITTIVTDKQHRMWVGTQSGGFSTFNKKTNAFVNY 252

Query: 251  LHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQR 310
             +  +   +++ N IR +  D++  LWIG+   L I +  T   +S   +     SLSQ 
Sbjct: 253  NNGKNG--AVNDN-IRKMIFDNKGNLWIGSLEGLMIMNPSTGKISSIKHDTENRKSLSQN 309

Query: 311  SVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD-KN 369
            SV S+FMD    +W+GTYFGG+N  +P    F N +N     + SDNVVS ++E+   KN
Sbjct: 310  SVYSLFMDKANAIWVGTYFGGVNVTYPTTTVFNNFQNGHINPAFSDNVVSSVLEENGGKN 369

Query: 370  LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGL 429
            LWIGT  GGLN Y   + + T Y   ++ S+  +GSN IK +  D+ ++L +IGTH GGL
Sbjct: 370  LWIGTEGGGLNFYEKSSNKNTLYKNIQNNSS-SLGSNLIKVLLKDKDENL-WIGTHGGGL 427

Query: 430  SILHRNSGQVENF--NQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIE 487
            + L R S   + F  +  +    +  + A+  D +G +W+GT + L + N  +  FT   
Sbjct: 428  NYLARGSNVFKRFLYSAEDQIATSREIPALAEDKKGIIWVGTQNGLYKSNELKNIFTRYN 487

Query: 488  KEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDIQKASILPVSNVTKL--FT 545
             +     +    I  L  D+   LW+G    L + K +G D     +  + N+     + 
Sbjct: 488  VKTASGIIEKPSIKCLLNDAEDNLWMGTTSELYI-KPKGQDRFAPVLQRIKNIRPKIKYI 546

Query: 546  NCIYEASNGIIWVGTREG-FYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN 604
            N I + S   IW+G+  G  YC+  ++  ++ +   NGLP+N +  ILED    LW+ST+
Sbjct: 547  NTIAQDSKKQIWIGSYYGGLYCYRSQNNTLEIFTEENGLPSNNIQAILEDDSHNLWISTS 606

Query: 605  RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGINGITTFRPELLLDNP 664
             G+S +NP T  F+N+  SDGL +N FN  +  ++  G +YFGG NG+T+F P  +  N 
Sbjct: 607  NGLSVYNPGTRHFKNYNTSDGLLNNVFNKNARLKSVNGALYFGGYNGLTSFYPNNIQSNN 666

Query: 665  YTPPVVITKLQLFNKVVRPDDETGILTKNISETKSITLKSWQTAFSIEFVVSNYISGQHN 724
               PVV T L+LFNK +  DDE+G+L  +I+ T  + L   Q   +IEF + N+I    N
Sbjct: 667  VASPVVFTDLKLFNKSISADDESGLLKADINFTNKLVLAYDQNTLTIEFALLNFIKSGKN 726

Query: 725  TFAYKLEGYDKEWYYLTDSRTVSYSNLPQGTYQFLVKAANSDGKWNPIPTALEIIVLPIW 784
             FAYKL+GYDK W  ++     +Y+NLP G+Y FLVK  N+DG ++     +EI+V P +
Sbjct: 727  HFAYKLDGYDKNWNTVSVP-AATYTNLPSGSYTFLVKGINNDGVYSANIGRIEIVVNPPF 785

Query: 785  YKTWWALLIFFATFAGFITFVFRFFWMRKSMEAQLEIERRDKEHQEEINQMKMRFFINIS 844
            Y TWWA L +F   A  +  + R+  +R   E +           +EIN+ K+ FF NIS
Sbjct: 786  YGTWWAYLFYFCVAAAILVIIIRYLLIRAIFEKE-----------KEINEHKLEFFTNIS 834

Query: 845  HELRTPLTLILTPLQEIINKISDR-WTRNQLEYIQRNANRLLHLVNQLMDYRRAELGVFE 903
            HE+RTPLTLI+ PL+++I    D       L+ I+ NA+RL++LV +L+D+R+AE G   
Sbjct: 835  HEIRTPLTLIVGPLEDLIETEKDNPELYRSLQPIKNNADRLMNLVTELLDFRKAESGKMP 894

Query: 904  LKAKKGNAHQLIQDNFLFYDKLARHKKITYTLHSELEDKEVLFDANYLELIVNNLLSNAF 963
            L    GN  +  ++ F+ +  +A  K+I Y   ++ E+ ++ FD   LE +  NLLSNAF
Sbjct: 895  LHVGSGNIVKFCREIFMAFQNMAISKQIEYNFEADKEEIQLYFDKVQLEKVFFNLLSNAF 954

Query: 964  KYTESGQSITVTLKEENGWLLLQVSDTGIGIPINKQGKIFERFYQIESEH-VGSGIGLSL 1022
            K+T     I   ++E +  + +++ D G GIP+ +Q  +FERFYQ +S   +G+G+GLS 
Sbjct: 955  KFTPKEGKINFKIEESDHLVTIKICDNGPGIPLAEQENLFERFYQAKSASTIGTGLGLSF 1014

Query: 1023 VQRLIELHHGRIELDS----EENKGST-FSVYLPQDLSVYKPSELASNNEQNEEEQVYST 1077
             + +++LHHG I  ++     +  G T F V L    S +K S+  ++   + +E  Y  
Sbjct: 1015 SKSILDLHHGNITFENIPQNADASGLTCFKVSLKTGKSHFKESDFITDAVYDHDEARYGN 1074

Query: 1078 NSKAMYFIDTEKVENESVESG----DKKRGTILIVEDNNEIRRYLSNGLADLFNTLEAGN 1133
                  F+ T  VENES        +++   +L+VEDN+++R +L   L   ++  E+ N
Sbjct: 1075 ------FL-TNAVENESAGENLVLAEEQSYHVLLVEDNDDVRSFLKKSLQTKYHIHESEN 1127

Query: 1134 GEEALEKLKDNEVDVIVTDVMMPVMDGIKLCKNVKQNIRTCHIPVIILSAKTDIKDQMEG 1193
            G + LEK  +   D+I++DVMMPV+DG++LC+ +K + RT HIP+++L+A++    Q+ G
Sbjct: 1128 GLKGLEKAFEIIPDIIISDVMMPVLDGLELCRRLKTDERTSHIPIVLLTARSAYVHQVNG 1187

Query: 1194 LQMGADDYIPKPFSLAILTTKIQNMMRTRRRMLDKYAKSLEVEPEKITFNAMDEALLKRA 1253
            L+ GAD YI KPF+L IL   IQN++  R ++  K+A  +++EP+ +  N  ++  L + 
Sbjct: 1188 LENGADSYIMKPFNLKILQLHIQNLLNAREKVKQKFAGIIQLEPKNLLVNTTEQNFLHKI 1247

Query: 1254 MAIVEKNMDNIEFSTDEFAREMNMSRSNLHLKLKAITGESTIDFIRKIRFNEAAKLLKDG 1313
            + I+E  M + +F     + E+ MS+  L+ K++A+T  S  +FI+ IR   AA+LLK  
Sbjct: 1248 IQIIETKMTDPDFDVPMLSSEIGMSQPTLYKKIRALTDLSVNEFIKSIRLKRAAQLLKQK 1307

Query: 1314 RYTVAEVSTMVGFNTPSYFATSFKKYFGCLPTEYIK 1349
               +++V+  VG+    YF+  FKKYFG  PTE+I+
Sbjct: 1308 IGNISDVAYAVGYTDRKYFSIEFKKYFGKSPTEFIQ 1343