Pairwise Alignments

Query, 1353 a.a., two-component system sensor histidine kinase/response (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  553 bits (1426), Expect = e-161
 Identities = 391/1377 (28%), Positives = 700/1377 (50%), Gaps = 88/1377 (6%)

Query: 10   YLFFLCLGMHSAFSETPEQITFSYISINEGLSQSTVFSIDQDKRGNMWFATYDGVNKYDG 69
            ++  +CL +  A     +    ++ S  +GL Q+ V SI QD++G MWF T +G++++DG
Sbjct: 20   WIGMMCLLLCGALQVNAQLSVSTHFSTEDGLVQNNVLSIAQDRQGFMWFGTENGLSRFDG 79

Query: 70   YAFTVYQHNEDDPNSIAND-ISRIVKTDSQGRVWIGTRDGLSRYDEEKDIFQNFFYEKNG 128
              +  +++   D N  ++  + R +  D Q R+W+GT  GL  +D   + F+        
Sbjct: 80   LRWRSFKNILGDTNKPSSPALIRSLFWDQQNRLWMGTALGLITFDPLTEKFRQIKLPYPI 139

Query: 129  KHLQVNGIEEISPEQLLISTPEGLIMFDIKESKFI------DDSFSTAMHKTIASTLYRQ 182
            +  +V  +       +L  T  G+++   KE+K I      DD      H     T++  
Sbjct: 140  QP-EVKQVTRDLSGNILAGTTAGIVLIT-KENKIIASARAFDDGEDILCH-----TIFCG 192

Query: 183  GD-QIYIGTSTDGLYTYSIT------QKTFEKVIPILGTKQIQAILQQSPTRIWVATEGA 235
             D +I+ GT+  GL+   I        +T  ++   L  ++I +I   +  R W  +   
Sbjct: 193  SDGRIWCGTNR-GLFEVKIKADRIMLSRTTAELPVFLQKEKITSIKMDNNGRFWFGSYAG 251

Query: 236  GLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFA 295
            GL L + +  +       P+ P   +++ IRS+     +++ + T + L  +     +  
Sbjct: 252  GLLLCHYQQGKFIEAQQQPALPGG-ATHKIRSIISLLDHKISVATADGLFFFDINNLNTF 310

Query: 296  SYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLS 355
              +S   +  SL   S+ S+F    G +W+G+Y+ GL+   P    F+++   P   +L+
Sbjct: 311  ELTSKAGDEQSLHNSSIHSLFQQRSGTIWIGSYYSGLDLIKPPLAPFRHLGIGPTALNLN 370

Query: 356  DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE 415
              VVS +       LWIGT  GG+N+YN  T++  SY   +  + + I SN IK ++ DE
Sbjct: 371  HRVVSSVCNRNQTELWIGTEGGGINIYNQSTKQ-VSYLKNQQGNDKSISSNFIKTLFKDE 429

Query: 416  KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVR 475
              +L +IGT +G L +L+ ++  +E+      ++   N  +I+ DG   LW+ + + L  
Sbjct: 430  DGNL-WIGTFSGTLDVLNASTNTIEHRLTGTERITEVN--SIVEDGLNRLWITSSNGLKV 486

Query: 476  FNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDIQKASI- 534
            +    R+    ++      + S      F+D+ KRLW   E    V K EG  I+   + 
Sbjct: 487  YK-RIRTHLKADRLMQQPGLKSFLAGVAFQDTKKRLWFATET--KVMKVEGDSIRIYHLK 543

Query: 535  LPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILE 593
             PV+ +++          +G I++G    G   FNE+  Q   Y   + + N  VY I  
Sbjct: 544  YPVNTISE---------HHGTIYLGLESRGLAAFNEQRGQFALYQINSQVNNRSVYSIAF 594

Query: 594  DSFGRLWLSTNRGISCFNPETEKFRNFTESDGLQSNQFN-TASYCRTSVGQMYFGGINGI 652
            D   R+WL+++ G+   +P+ +    +T++DGL S  FN  A Y R +   ++FG ++G+
Sbjct: 595  DRQNRIWLASDSGLLKVSPKQKIVTQYTKADGLISTNFNINARYERDN--NLFFGTLDGL 652

Query: 653  TTFRPELLLDNPYTPPVVITKLQLFNKVVRPDDETGILTKNISETKSITLKSWQTAFSIE 712
              F P+ + D+     +VIT +++F+  V  D  + +L K+I+ T  + L   Q + + E
Sbjct: 653  IYFDPDQIRDDTTKSSIVITGMRIFDVPVEID--SSVLRKSITYTNRVELSHNQNSLTFE 710

Query: 713  FVVSNYISGQHNTFAYKLEGYDKEWYYLTDSRTVSYSNLPQGTYQFLVKAANSDGKWNPI 772
            F + ++I  + N F Y L+G  K W   T+    +++NL  GTY  +V   N    W   
Sbjct: 711  FALLDFIKPKKNAFRYSLQGLSKGWT-TTNLAEATFNNLAPGTYTLMVSGNNGSPNWME- 768

Query: 773  PTALEIIVLPIWYKTWWALLIFFATFAGFITFVFRFFWMRKSMEAQLEIERRDKEHQEEI 832
            P  L I + P ++ TWWA +++       + F+ R+F +R  ++            ++E+
Sbjct: 769  PIRLTINIHPPFWATWWAYMLYGIILTSIVFFISRYFVLRTLLK-----------REDEL 817

Query: 833  NQMKMRFFINISHELRTPLTLILTPLQEIINKIS-DRWTRNQLEYIQRNANRLLHLVNQL 891
            +Q K+ FF N+SHE+RT L+LI  P++++++     +  ++++  +  NA RLL LVN+L
Sbjct: 818  HQYKINFFTNVSHEIRTHLSLISPPIEQLVSDEQLGKKQKDKILGVAGNARRLLTLVNEL 877

Query: 892  MDYRRAELGVFELKAKKGNAHQLIQDNFLFYDKLARHKKITYTLHSE-LEDKEVLFDANY 950
            +D+R+ E     L     +   +++D    + + A  K+IT  L  E L+   +L DA  
Sbjct: 878  LDFRKTEDKHLTLSENVQDLLPILEDCLQMFSETAEQKQITTLLEKENLKSAFLLCDAFQ 937

Query: 951  LELIVNNLLSNAFKYTESGQSITVTLKEENGWLLLQVSDTGIGIPINKQGKIFERFYQIE 1010
            L+  + NLL+NA+K+T++G  + + + +    + + + D G GI  +   K+FE +YQ+ 
Sbjct: 938  LKKAIINLLANAYKFTQNGGLVKLRISQTYHEVTITIEDNGRGISQSHLNKLFENYYQVA 997

Query: 1011 S---EHVGSGIGLSLVQRLIELHHGRIELDSE-----ENKGSTFSVYLPQDLSVYKPSEL 1062
                ++ G GIGL+L + ++ELH G I + S      E   ++F++ LP+       S  
Sbjct: 998  DHGFQNTGYGIGLALSKAIVELHQGTITVTSRLETMNEPGHTSFTISLPKRQKEAYDSLA 1057

Query: 1063 ASNNEQN-EEEQVYSTNSKAMYFIDTEKVENESVESGDKKRGTILIVEDNNEIRRYLSNG 1121
            A N E    +     T  K +  +          ++ + ++ TIL+ EDN E+   L + 
Sbjct: 1058 AYNAEHTFPDHGDEQTQHKPLLPL---------TQADESQKPTILLAEDNLELATLLDDI 1108

Query: 1122 LADLFNTLEAGNGEEALEKLKDNEVDVIVTDVMMPVMDGIKLCKNVKQNIRTCHIPVIIL 1181
            L   ++ + + NG+EA E+ K +  D+I++DVMMP M G   C  +K N+ T HIP I+L
Sbjct: 1109 LNPYYHVIISRNGKEAWEQAKRHIPDLIISDVMMPEMSGFDFCDLIKSNVATNHIPFILL 1168

Query: 1182 SAKTDIKDQMEGLQMGADDYIPKPFSLAILTTKIQNMMRTRR-------RMLDKYAKSLE 1234
            +AKT  +D + GL  GAD Y+ KPF+   L  ++ N++   +       ++L+K ++ ++
Sbjct: 1169 TAKTQTEDVITGLSHGADVYLTKPFTPQALLLQVNNLIVAIQNVHTHVGQLLNKNSEPID 1228

Query: 1235 VEPEKITFNAMDEA--LLKRAMAIVEKNMDNIEFSTDEFAREMNMSRSNLHLKLKAITGE 1292
            +  + I      E+   + + +  +  +++N EF  +E AR MNMS   L+ K+K++TG 
Sbjct: 1229 IFNQLIQTQLGTESKKFMNQLVENITASIENPEFGVNELARLMNMSTPILYKKVKSVTGS 1288

Query: 1293 STIDFIRKIRFNEAAKLLKDGRYTVAEVSTMVGFNTPSYFATSFKKYFGCLPTEYIK 1349
            S  DFI+ +R  +AA+LL+   YTV +VS MVGF    YF+  FKK+FG LP+E+I+
Sbjct: 1289 SVNDFIKGLRLKKAAELLETRLYTVYQVSYMVGFLDSRYFSKEFKKFFGKLPSEWIE 1345