Pairwise Alignments

Query, 1353 a.a., two-component system sensor histidine kinase/response (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1365 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  796 bits (2056), Expect = 0.0
 Identities = 467/1390 (33%), Positives = 766/1390 (55%), Gaps = 70/1390 (5%)

Query: 3    KLKKIVIYLF---FLCLGMHSAFSETPEQITFSYISINEGLSQSTVFSIDQDKRGNMWFA 59
            KL+ I ++ F   F+C  + +      + + F+++ +  GLSQ++V +I QDK   +W  
Sbjct: 2    KLRLIALWFFPMLFICTTLCAQ-----KHLVFNHLRMENGLSQNSVMAITQDKNQFIWMG 56

Query: 60   TYDGVNKYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDGLSRYDEEKDIF 119
            T  G+N+YDGY F +Y ++ D+ NS+++++   + +DS+GR+W+GT +GL+ Y+++ D F
Sbjct: 57   TRHGLNRYDGYRFKIYNNSSDNLNSLSDNVINTLLSDSKGRLWVGTENGLNIYNDKNDHF 116

Query: 120  QNFFYEKNGKHLQVNGIE---EISPEQLLISTPEGL-IMFDIKESKFIDDSFSTAMHKTI 175
                   +      + +E   E   + + + T  GL ++ D ++  F    F    +K+ 
Sbjct: 117  YRINKRSSANSFSCDSVECIYEDPQKNIWVGTYNGLNLVIDTEKQIFKKFLFDKPNYKSA 176

Query: 176  ASTLYR----QGDQIYIGTSTDGLYTYSITQKTFEKVIP-------ILGTKQIQAILQQS 224
             + ++     +   +++GT    +  Y +  K   ++          + +  +++I+   
Sbjct: 177  LNCIFSIFKDEKQNLWVGTYNGLVRIYQVKGKYHFEIFRHNPNNKNSISSNAVKSIVIDK 236

Query: 225  PTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDL 284
              R+W+ T   GL L + + K  K Y  S ++P SI +N IR L  D    +WIGT   L
Sbjct: 237  QKRLWLGTYN-GLNLFDYEHKTFKRYQTSATDPNSIINNDIRKLTRDKVGNIWIGTQEGL 295

Query: 285  NIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKN 344
            +I    T  F++Y  +P +   LSQ S+ SIF D  G ++LGTY+ G N  +P    F  
Sbjct: 296  SILDPNTRKFSNYRYDPEQPDGLSQNSIHSIFQDLNGSVYLGTYYKGANVVYPSATPFTV 355

Query: 345  IRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIG 404
             RN   +  LS ++VS +VED++ NLWIGT  GGLN  N     FT Y L E  S  G+ 
Sbjct: 356  FRNSKTRQGLSSDIVSAMVEDQNHNLWIGTEGGGLNYVNRSNHTFTYYKL-EPNSNNGLN 414

Query: 405  SNNIKAVYVDEKKSLVYIGTHAGGLSILH---RNSGQVENFNQRNSQLVNENVYAILPDG 461
            SN IK + +D+   L+ +GTH GGL + +    N  ++ N   + +      V AI  D 
Sbjct: 415  SNLIKTLCLDKTGQLL-VGTHRGGLYLFNAAGHNFKKIINVKNKKNNPGGSEVIAITEDS 473

Query: 462  EGNLWLGT---LSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEG 518
            +G +W+G+   LS L + N    + TT++   +   + +K I  +F D  K LWIG   G
Sbjct: 474  DGTVWVGSRDGLSTLKKTNGLYAA-TTVKSPLEQN-LRNKYIQVIFEDKAKNLWIGTMAG 531

Query: 519  LSVFKQEGLDIQ---KASILPVSNVTKLFTNCIYEASNGIIWVGTR-EGFYCFNEKDKQI 574
            L  +      I    K    P S +     NCI +  NG I VGT   G   F+ K ++ 
Sbjct: 532  LYAYHPATKRITAYYKNKTKPGS-LNSDHINCIVQIQNGNICVGTSFGGLSIFDNKSRKF 590

Query: 575  KRYNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNPETEKFRNFTESDGLQSNQFNTA 634
            K YN  +GLPN+ V GI+ED    LW+ST++G+S    +T +F N+T+SDGL  N FN  
Sbjct: 591  KNYNEKDGLPNSNVLGIIEDEENNLWISTDKGLSKLITKTGRFINYTKSDGLAGNDFNIR 650

Query: 635  SYCRTSVGQMYFGGINGITTFRPELL--LDNPYTPPVVITKLQLFNKVVRPDDETGILTK 692
            S+ + S G+++FGG +G+T F P  +    N    P+  T+L+LF+K V  +   G+L +
Sbjct: 651  SFLKDSRGELFFGGYDGLTAFYPSQIDINSNRNVAPITFTELKLFDKPVAVNAPDGLLNE 710

Query: 693  NISETKSITLKSWQTAFSIEFVVSNYISGQHNTFAYKLEGYDKEWYYLTDSRTVSYSNLP 752
            +I   K IT K     FS++F + NYI  + N++ Y L+G+ K+W   TD  +V+YS+LP
Sbjct: 711  DIKSIKQITFKHDNNNFSLDFALLNYIKPEKNSYRYILKGHSKDWVK-TDVPSVTYSDLP 769

Query: 753  QGTYQFLVKAANSDGKWNPIPTALEIIVLPIWYKTWWALLIFFATFAGFITFVFRFFWMR 812
             G Y F+V   N+DG     P +L+I VLP ++ TWWA LI+ A F+G +  + R+ ++R
Sbjct: 770  AGNYTFIVTGNNNDGNPGNKPASLKITVLPPFWATWWAYLIYLACFSGLLFLIVRYLFVR 829

Query: 813  KSMEAQLEIERRDKEHQEEINQMKMRFFINISHELRTPLTLILTPLQEIINKI-SDRWTR 871
              ++             E+I +MK+ FF  ++HE+RTPLTLIL PL+ +  +  +D    
Sbjct: 830  ALLK-----------RTEDIQKMKLNFFTYVAHEIRTPLTLILGPLENLSKQYQTDTELN 878

Query: 872  NQLEYIQRNANRLLHLVNQLMDYRRAELGVFELKAKKGNAHQLIQDNFLFYDKLARHKKI 931
             Q+  I+ NANRL+ L+ +LMD+R+AE G   L   + N    I + F+ +  LA+   I
Sbjct: 879  RQIIPIKNNANRLMRLITELMDFRKAETGHLTLHVTEDNIVDFINEIFISFSHLAQTNDI 938

Query: 932  TYTLHSELEDKEVLFDANYLELIVNNLLSNAFKYTESGQSITVTLKEENGWLLLQVSDTG 991
             Y      E+  + FD   LE ++ NLLSNAFK+ + G  I+VTL + +  + + ++D G
Sbjct: 939  QYEFVRGQENISLFFDKRQLEKVLFNLLSNAFKFCDKGGKISVTLVDMDNEVAISIADNG 998

Query: 992  IGIPINKQGKIFERFYQIESEH---VGSGIGLSLVQRLIELHHGRIELDSE-----ENKG 1043
            +GIP      +F  ++Q++ +H   +GSGIGL+L + ++E H G I ++S      E   
Sbjct: 999  LGIPAESLKNLFSDYFQVDEQHSNQIGSGIGLALSKAIVEEHKGHIAVESTPAENGERGF 1058

Query: 1044 STFSVYLPQDLSVYKPSELASNNEQNEEEQVYSTN-SKAMYFIDTEKVENESVESGDKKR 1102
            + F+V L +  S +K +      +      +Y+    K +  +  EK  + S E      
Sbjct: 1059 TNFTVRLKKGKSHFKTAIFDGAKDYPTHPNIYTQQPEKELNILKPEKETDLSTE------ 1112

Query: 1103 GTILIVEDNNEIRRYLSNGLADLFNTLEAGNGEEALEKLKDNEVDVIVTDVMMPVMDGIK 1162
             TIL+VEDN+EIR+ +++ +   +   E+ NG    E   +   D+I+ D+MMP+MDGI+
Sbjct: 1113 -TILVVEDNSEIRQLIASLIGGHYLVAESENGLMGWETAVETLPDLIICDIMMPIMDGIE 1171

Query: 1163 LCKNVKQNIRTCHIPVIILSAKTDIKDQMEGLQMGADDYIPKPFSLAILTTKIQNMMRTR 1222
            LC+ +K++ RT HIPVIIL+A++    Q+ GL+ GAD YI KPFS  +L   ++N++ +R
Sbjct: 1172 LCRRLKEDERTSHIPVIILTARSSHIHQVSGLETGADAYITKPFSPELLLLNVRNLLMSR 1231

Query: 1223 RRMLDKYAKSLEVEPEKITFNAMDEALLKRAMAIVEKNMDNIEFSTDEFAREMNMSRSNL 1282
            + M  K+ K + ++P+++T NA+DEA + + +  +++++ + +F   E A  + MSR  L
Sbjct: 1232 QVMRQKFLKHIHLQPKELTINAIDEAFMLKLLKYIDEHITDEDFGVSELASMVGMSRPVL 1291

Query: 1283 HLKLKAITGESTIDFIRKIRFNEAAKLLKDGRYTVAEVSTMVGFNTPSYFATSFKKYFGC 1342
            + K++ +T  S  DF++ IR  +A +L K  R+T+ EV+  VGFN P YF+  FKK FG 
Sbjct: 1292 YKKIRNLTNLSVNDFVKSIRLKKAMELFKQNRFTIYEVAYQVGFNDPKYFSREFKKQFGK 1351

Query: 1343 LPTEYIKKSK 1352
             P  ++  S+
Sbjct: 1352 SPRAFMNGSE 1361