Pairwise Alignments

Query, 1353 a.a., two-component system sensor histidine kinase/response (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  678 bits (1749), Expect = 0.0
 Identities = 430/1372 (31%), Positives = 718/1372 (52%), Gaps = 67/1372 (4%)

Query: 5    KKIVIYLFFLCLGMHSAFSETPEQITFSYISINEGLSQSTVFSIDQDKRGNMWFATYDGV 64
            KK   ++FFL +G    F+++   I   Y+ +  GLS + V S+  D  G MW  TYDG+
Sbjct: 6    KKTACFIFFLWMGTGICFAQSTA-IPLKYLGVESGLSNNVVNSLYLDHFGFMWMGTYDGL 64

Query: 65   NKYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDGLSRYDEEKDIFQNFFY 124
            N+YDGY F V+++   D +S+ N+   ++  D++ RVW+GT+ G+S YD     F    Y
Sbjct: 65   NRYDGYHFKVFRNGWGDEHSLVNNHITVLNGDAKNRVWVGTQKGISYYDYADSRFHQLIY 124

Query: 125  EKNGKHLQVN-GIEEISPEQLL---ISTPE-GLIMFDIKESKFIDDSFSTAMHKTIASTL 179
               G+  +V+  I  I+  Q L   ++T E GL M     S      F      T+ + L
Sbjct: 125  LDKGRKNEVSYAINSIAISQALAVYVATEEKGLFMLKKNSSLAERIPFGKNFDFTVKA-L 183

Query: 180  YRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLF 238
            Y   DQ +++     GL  Y   Q     V   L +  +  I + +   +W+ TE  GLF
Sbjct: 184  YIDDDQTLWLFIKDVGLCKYDKDQNKVRLVTAALSS--VTCITKDTKQTLWLGTE-RGLF 240

Query: 239  LINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYS 298
              +     I  +       + +++  I  L +D Q +LWI T       ++      SY 
Sbjct: 241  QFDKVKASISKF------NQHLNNENIMGLLLDRQQKLWISTDGGGVAVYDTKKQKTSYL 294

Query: 299  SNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYK-NSLSDN 357
            S   E G LS  SV  ++ D +   W+ T  GG+N       +F  I++ P K NSL +N
Sbjct: 295  SAGKEKGLLSSNSVAQVYEDHESRKWIATLRGGVNIIDTENEQFTTIKHDPLKSNSLINN 354

Query: 358  VVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK 417
             V    ED++KN+WIGT+ GGL+++N     F +Y    D ++  + SN + ++  D   
Sbjct: 355  FVLSFSEDENKNIWIGTDGGGLSVWNRKLNTFANYAKTSDPNS--LTSNFVTSILNDADH 412

Query: 418  SLVYIGTHAGGLSILHRNSGQVENFNQRNSQ--LVNENVYAILPDGEGNLWLGTLS--AL 473
            + V++ + +GG+   ++ +G+  ++N  N+   + + N++ +  D + N+W+GT    AL
Sbjct: 413  N-VWVASFSGGIDRFNKTTGKFVHYNCYNTSKGVDDINIWKLYQDKQQNIWVGTTKGGAL 471

Query: 474  VRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQEGLDIQKAS 533
             R+N     F   + +        K I +LF+DS  RLW G    L         I+   
Sbjct: 472  YRYNKSIDKFELFDTKL-------KDIHSLFQDSKGRLWAGNYTEL---------IEIDP 515

Query: 534  ILPVSNVTKL--FTNCIYEASNGIIWVGTREG-FYCFNEKDKQIKRYNTTNGLPNNVVYG 590
            +    N TK+      I E  N  IW+GT  G    F+ + K+IKRY  ++GLP+N V  
Sbjct: 516  VNKKHNYTKINFAIRAIQEDFNHQIWIGTEGGGLLLFDPETKKIKRYIQSDGLPSNSVLN 575

Query: 591  ILEDSFGRLWLSTNRGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGIN 650
            IL+D+ G LW ST  G+S F+     F+N+  +DGLQSNQFN  +  + + G   FGGI 
Sbjct: 576  ILQDAQGNLWCSTYNGLSRFDVRHHSFKNYYATDGLQSNQFNYNAALKLANGNFLFGGIG 635

Query: 651  GITTFRPELLLDNPYTPPVVITKLQLFNKVVRPDDETGILTKNISETKSITLKSWQTAFS 710
            G   F P+ +  N   P +V+T  ++ N  +  D ++     ++     I +       S
Sbjct: 636  GFNLFSPDSIKKNKRIPKMVLTDFRINN--IPLDQDSAYNDISVINLARIEIPFSDAVIS 693

Query: 711  IEFVVSNYISGQHNTFAYKLEGYDKEWYYLTDSRTVSYSNLPQGTYQFLVKAANSDGKWN 770
            I++    +      ++AY LEG+D++W Y+    T  YS L +G Y+  +K+ +++G W+
Sbjct: 694  IDYAAIEFSFQDQISYAYYLEGWDRDWNYVNKLSTAYYSRLNEGEYKLHIKSTDTEGAWS 753

Query: 771  PIPTALEIIVLPIWYKTWWALLIFFATFAGFITFVFRFFWMR-KSMEAQLEIERRDKEHQ 829
                 + I +LP WY+TWWA  I+       I ++F+ +  R + ++ ++EI     E +
Sbjct: 754  NNEKIVVIRILPPWYRTWWAYTIYLI-IGSSIFYLFQTYRNRQRRLKHEVEITNLKMERE 812

Query: 830  EEINQMKMRFFINISHELRTPLTLILTPLQEIINKISDRWTRNQLEYIQRNANRLLHLVN 889
            +++N+ K+ FF NISHELRTPLTLI+ P+++II K      +N L  + RN+ RLL LV+
Sbjct: 813  KDLNEKKLNFFTNISHELRTPLTLIVNPIKDIILKKDPGPEKNDLNIVYRNSRRLLSLVD 872

Query: 890  QLMDYRRAELGVFELKAKKGNAHQLIQDNFLFYDKLARHKKITYTLHSELEDKEVLFDAN 949
            QL+ +R+ E     LK  + N ++   + FL ++ LA+   I YT   E E+ ++  D +
Sbjct: 873  QLLLFRKTESENDTLKIVRINLYKFTNEIFLCFNYLAKQNHIDYTFECEEEELDIYADKD 932

Query: 950  YLELIVNNLLSNAFKYTESGQSITVTLKEENGWLLLQVSDTGIGIPINKQGKIFERFYQI 1009
             LE++  NLLSNA K+T  G  +  ++K     + ++VSD+G GIP +   K+F++FY++
Sbjct: 933  KLEIVFFNLLSNALKFTPKGGFVKFSVKPLGMRVQIEVSDSGPGIPAHVGEKLFDKFYKV 992

Query: 1010 ---ESEHVGSGIGLSLVQRLIELHHGRIELDSEENKGSTFSVYLP------QDLSVYKPS 1060
               ES  +G GIGL L +  +ELH G+I   S +  G+ F + +P      Q   V++ +
Sbjct: 993  MSNESLKMGFGIGLYLAKNFVELHKGKISFRSNQGMGTIFLIDIPVGEPNLQHSGVFQ-N 1051

Query: 1061 ELASNNEQNEEEQVYSTNSKAMYFIDTEKVENESVESGDKKRGTILIVEDNNEIRRYLSN 1120
            EL   NE   +E+    N       DTE V N  +   D    +IL+++DN EI  Y+ +
Sbjct: 1052 ELTYVNELIAQEEEAENN-------DTEHVGNLQLLISDLH--SILVIDDNPEIIDYIRH 1102

Query: 1121 GLADLFNTLEAGNGEEALEKLKDNEVDVIVTDVMMPVMDGIKLCKNVKQNIRTCHIPVII 1180
               + F   +A NG + L++ K+   D++++DV M  ++GI+LCK +K +    HIPVI+
Sbjct: 1103 IFQENFKIYKAENGTDGLKRCKEYLPDIVISDVNMDGLNGIELCKAIKDDSALSHIPVIL 1162

Query: 1181 LSAKTDIKDQMEGLQMGADDYIPKPFSLAILTTKIQNMMRTRRRMLDKYAKSLEVEPEKI 1240
            L+     + +++G+++GA D+I KPF   + T KI ++++ R  +   +   + ++ +  
Sbjct: 1163 LTGDPSPEVKLKGIEVGAYDFISKPFDRELFTAKINSIIKNRTNLQSYFYNEITLKSDAH 1222

Query: 1241 TFNAMDEALLKRAMAIVEKNMDNIEFSTDEFAREMNMSRSNLHLKLKAITGESTIDFIRK 1300
              +  D+  L++ + I+E+N+    F+    A ++ MS SNL+ ++KA +G+S   FIR 
Sbjct: 1223 KVSQEDKGFLQKCIMIIEENLMEDSFNVKILASDLGMSHSNLYKRIKATSGQSVNGFIRF 1282

Query: 1301 IRFNEAAKLLKDGRYTVAEVSTMVGFNTPSYFATSFKKYFGCLPTEYIKKSK 1352
            IR  +AA+LL +    + E +  VG N   YF   F+K F   P+E+IKK +
Sbjct: 1283 IRLRKAAELLINTNLNINEAAFRVGINDSKYFREQFQKLFKLTPSEFIKKHR 1334