Pairwise Alignments

Query, 1353 a.a., two-component system sensor histidine kinase/response (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1374 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  612 bits (1579), Expect = e-179
 Identities = 417/1415 (29%), Positives = 705/1415 (49%), Gaps = 129/1415 (9%)

Query: 3    KLKKIVIYLFFLCLGMHSAFSETPEQ--ITFSYI----SINEGLSQSTVFSIDQDKRGNM 56
            +L   +++ F L   + +    T  Q  +T  Y+     INEGL   +  +  +DKRG +
Sbjct: 5    RLTCFILHFFLLFTHVKAQELRTNNQPVLTGHYVIKTYGINEGLPSKSTTAALKDKRGFI 64

Query: 57   WFATYDGVNKYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDGLSRYDEEK 116
            W  T +G+ K+DGYAF +Y +   D  S+ N+    V  D  G  W+GT +GL+++D   
Sbjct: 65   WVGTENGLCKFDGYAFKIYVNITGDTTSLTNNYINAVVEDKNGVFWVGTMNGLNKFDPVT 124

Query: 117  DIFQNFFYEKNGK-HLQVNGIEEI---SPEQLLISTPEGLIMFDIKESKFIDDSFSTAMH 172
            + F+ F++++N +  L  N I  +      +L + T +G  +F+   + F          
Sbjct: 125  EKFERFYHKENNRTSLSNNKIWSLLIDRTNKLWVGTDDGFNLFNKNSNAF---------- 174

Query: 173  KTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT 232
                                      ++ Q  F+    I G K + AI +     +W+  
Sbjct: 175  --------------------------TVYQPDFKDPDAIKG-KSVNAIAEDKAGNLWLGN 207

Query: 233  EGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF--NDLNIYHEG 290
               GL   + KTK  KNY       +  + N I +L +D+   +WIG++   DL  +   
Sbjct: 208  WSKGLNKFDKKTKSFKNYTQKEVAGEK-NPNDIWTLCLDADGMIWIGSYWKGDLFRFDPK 266

Query: 291  TDSFASYSSNPVENGS----LSQRSVRSIFMDSQGGMWLGTYF--------------GGL 332
            ++SF +Y+S    N S    L+  + + +   S G  W+ T                GGL
Sbjct: 267  SESFTTYASKGTGNASIFSVLNLGTEKLLVGGSAGVFWVNTKLNKWEKIEELEFFANGGL 326

Query: 333  -------------NYYHPIR-NRFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDG 377
                         N +  I  N++K N  ++P+  +   +++S       K+ W+GTN G
Sbjct: 327  YRDKSGMIWICGKNGFSKIDFNQYKFNFISLPFGQAEIKSIISY-----GKDFWVGTNKG 381

Query: 378  GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG 437
             L  YNP     +   LQ   +   + S+ I  +  D K  L  +G +  G       + 
Sbjct: 382  -LFKYNPDNHAVSK--LQHTGNPNSLSSSEIINLSTDLKNRLWVMGEN--GFDRYDEKAN 436

Query: 438  QVENFNQRNS--QLVNENVYAILPDGEGN-LWLGTLSALVRFNPEQRSFTTIEKE-KDGT 493
            +  + + R++     NE+V+  L +   +  +L T + L  +N +  S+T    + K+  
Sbjct: 437  KFIHHHHRSALGSFFNEDVFRDLIEVNADEYYLATDAGLKVYNDKTNSYTHYFNDPKNQA 496

Query: 494  PVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDIQKASILPVSN-----VTKLFTNC 547
             + +  +  L +D+   +WIG    GLS F  +    +K S   ++N     ++    N 
Sbjct: 497  SLSNNHLYCLLKDAQGNVWIGTYGSGLSRFNPK---TRKFSNYMINNSKRGGISNNIVNS 553

Query: 548  IYEASNGIIWVGTREGFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTNRGI 607
            +Y  S+  +WV TR+G   +  K    + Y+  NG  +NV   ++ED+ GRLW++T +GI
Sbjct: 554  LYLDSHQNVWVCTRDGLNKYIAKTNTFEIYSKQNGFASNVFTDLVEDNNGRLWVTTEQGI 613

Query: 608  SCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGINGITTFRPELLLDNPYTP 667
            S F+P ++  +N+ E DG+ +N    A+ C+ + G++Y  G  GI  F P+LL  N   P
Sbjct: 614  SLFDPVSKMVKNYDEKDGVYAN----AAICKNAKGEIYLAGSKGIVYFNPQLLKYNKTAP 669

Query: 668  PVVITKLQLFNKVVRPDDETGILTKNISETKSITLKSWQTAFSIEFVVSNYISGQHNTFA 727
             V  +   +FNK++ P D++  L   +  T+ ITL   Q+  S  FV  NY   + N +A
Sbjct: 670  AVYFSDFSIFNKLILPGDDSP-LKLPVYMTREITLPYSQSVLSFGFVALNYTLSEKNKYA 728

Query: 728  YKLEGYDKEWYYLTDSRTVSYSNLPQGTYQFLVKAANSDGKWNPIPTALEIIVLPIWYKT 787
            Y LEG+DK+W Y      V+Y+NL  G Y   V+A+N+DG WN    ++ I + P WY+T
Sbjct: 729  YFLEGFDKKWNYSGSEHKVTYTNLNPGKYVLKVRASNNDGIWNMEGNSIGITITPPWYRT 788

Query: 788  WWALLIFFATFAGFITFVFRFFWMRKSMEAQLEIERRDKEHQEEINQMKMRFFINISHEL 847
            WWA  I+  TF G I    ++   R ++E Q+++   + E ++E+++ K+ FF N+SHE 
Sbjct: 789  WWAFCIYGLTFFGMIYAYLKYREHRANLEFQVKLAHVESEKEKELSEKKLSFFTNVSHEF 848

Query: 848  RTPLTLILTPLQEIINKISDRWTRNQLEYIQRNANRLLHLVNQLMDYRRAELGVFELKAK 907
            RTPLTLI+ P++E++ K         L  + RNA RLL LV+QL+ +R+A+    +LK  
Sbjct: 849  RTPLTLIINPVKELLYKNDKNVDTTDLNIVYRNAKRLLSLVDQLLLFRKADTYGEKLKVA 908

Query: 908  KGNAHQLIQDNFLFYDKLARHKKITYTLHSELEDKEVLFDANYLELIVNNLLSNAFKYTE 967
              N   L ++ FL +   AR K I        E      D   +E++  NLLSNA K+T 
Sbjct: 909  PVNLVSLCKEVFLCFVHQARSKNIVLDFIGTDEVIPFYADREKIEIVFFNLLSNAIKFTP 968

Query: 968  SGQSITVTLKEENGWLLLQVSDTGIGIPINKQGKIFERFYQ---IESEHVGSGIGLSLVQ 1024
             G ++ + +      + + + DTG GI      K++E+FYQ    +S   G GIGL L +
Sbjct: 969  EGGTVKMIVGNRGEDIQVGIEDTGCGITTVAGEKLYEKFYQDPGNKSAKGGFGIGLYLAK 1028

Query: 1025 RLIELHHGRIELDSEENKGSTFSVYLPQDLSVYKPSELASNNEQNEEEQVYSTNSKAMYF 1084
              IE+H G I   S ENKG+ F++ L + +S +K + +       +E  V + +S     
Sbjct: 1029 NFIEMHGGTINYTSTENKGTIFNISLRRGISHFKDAVIL------QEALVDTDSSLFKEL 1082

Query: 1085 IDTEKVENESVESGDK---------KRGTILIVEDNNEIRRYLSNGLADLFNTLEAGNGE 1135
            I+ E   N+ VE+ ++            T+LI++DN EIR YL       ++  EAGNGE
Sbjct: 1083 IEDEITANKIVEAAEEPLIDSQLALDLKTLLIIDDNIEIREYLKQVFRMDYHLYEAGNGE 1142

Query: 1136 EALEKLKDNEVDVIVTDVMMPVMDGIKLCKNVKQNIRTCHIPVIILSAKTDIKDQMEGLQ 1195
            +  + +K+   D+++ DVMM  + GI+LC  +K+++   HIP+I+L+A +  + +++G++
Sbjct: 1143 DGYDMVKELLPDIVICDVMMDGITGIELCSKIKEDVAVSHIPIILLTAISAPEVKLKGIE 1202

Query: 1196 MGADDYIPKPFSLAILTTKIQNMMRTRRRMLDKYAKSLEVEPEKITFNAMDEALLKRAMA 1255
             GADDYI KPF    L  ++ ++++++  +   +   + +       +A  +  L   + 
Sbjct: 1203 GGADDYISKPFDKDFLKARVASILKSKNALQRYFYNEITLNSNNTKISAEYKEFLDHCIR 1262

Query: 1256 IVEKNMDNIEFSTDEFAREMNMSRSNLHLKLKAITGESTIDFIRKIRFNEAAKLLKDGRY 1315
            IVE+++ + +F+ D     + MSRSNL+ K+K+I+G+S   FIR IR  +AA++  +   
Sbjct: 1263 IVEEHLIDPDFNIDTLTATIGMSRSNLYRKIKSISGQSANGFIRFIRLRKAAEIFINTDK 1322

Query: 1316 TVAEVSTMVGFNTPSYFATSFKKYFGCLPTEYIKK 1350
            T+ E S MVG N P YF   F + F   P++YIKK
Sbjct: 1323 TIQETSYMVGINDPKYFREQFYRLFNMNPSQYIKK 1357