Pairwise Alignments

Query, 1353 a.a., two-component system sensor histidine kinase/response (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  641 bits (1653), Expect = 0.0
 Identities = 428/1384 (30%), Positives = 700/1384 (50%), Gaps = 79/1384 (5%)

Query: 4    LKKIVIYLFFLCLGMHSAFSETPEQITFSYISINEGLSQSTVFSIDQDKRGNMWFATYDG 63
            +KK   YLFFL + +   F++   Q  FS++ I +GLS ++V +I +D  G MWF T DG
Sbjct: 1    MKKNFRYLFFLII-LIIRFTDLHAQDLFSHLGIEKGLSNNSVNAIYKDHFGFMWFGTDDG 59

Query: 64   VNKYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDGLS------------- 110
            +N+Y+GY+F +Y++N +D +S+ N+    +  D  G +WI T+ G+S             
Sbjct: 60   LNQYNGYSFRIYRNNPNDSSSLVNNQVIGMAEDGSGTLWIATKRGVSVLHSFPSKFVKPI 119

Query: 111  --RYDEEK--DIFQNFFYEKNGKHLQVNGIEEISPEQLLISTPEGLIMFDIKESKFIDDS 166
               Y+++K   I Q  +  K G H  V           + ++  GL+++D    +    S
Sbjct: 120  FKAYNDKKARPIDQEIYAIKGGNHGDV----------FIGASDLGLLVYDNHSRETRQVS 169

Query: 167  FSTAMHKTIASTLYRQ----GDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQ 222
            F     K +     R      D+ ++     GL  Y    K    V      +   +I  
Sbjct: 170  FQPG-EKVLTPYSIRAIRPVQDRAWLINPAKGLAYYDYRSKQISLVSSNGDIRNANSIEA 228

Query: 223  QSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN 282
                 +W+ T+  GL+  N   K  K Y  +P     + +  I SLA D +NRL I T  
Sbjct: 229  DQSGNLWIGTDH-GLYRYNILAKSFKWYSVAPGQ---LLAQRILSLAFDRRNRLLIATDG 284

Query: 283  D-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNR 341
              +NI     +SF SY +      SL+  ++  I  D +  +W+GT  GG+N     RN 
Sbjct: 285  GGINIMDTEKESF-SYQTAGESPSSLNSNAISVILKDEEHRIWVGTLRGGINVLDRKRNE 343

Query: 342  FKNI-RNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESA 400
            FK+I RN   + SL  + +    ED+D  +WIGT+ GG++L++ + + F +Y   E+ + 
Sbjct: 344  FKHIYRNPLSQQSLVSDFILSFCEDRDGKIWIGTDGGGISLWDRL-KGFKTYR-HENGNP 401

Query: 401  RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPD 460
            + + SNN+ ++ V     +++I T  GG++  +R SG  + +   NS   +ENV+ +  D
Sbjct: 402  QSLSSNNVTSI-VRSNNDVIWIATFGGGINRYNRGSGTFKYYPCANSWGKDENVWKLFID 460

Query: 461  GEGNLWLGT---LSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGEE 517
             +G +W GT   +  L  +N     F     E        K I  +  D    LW G   
Sbjct: 461  KKGGIWAGTCVGVGLLYHYNVASDRFEPFNNEH------LKNIIAINEDKLGNLWFGSFN 514

Query: 518  GLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EGFYCFNEKDKQIKR 576
             L  +   G  I      P+ ++   F N      +G ++VGT+  G   +N K+   + 
Sbjct: 515  KLYKYTAGGKVITYDIRYPIRSI---FFN-----KSGDLFVGTQYAGLLKYNSKNGSFQA 566

Query: 577  YNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNPETEKFRNFTESDGLQSNQFNTASY 636
            +  ++GL NN V  I ED    LWLST  G++ FN     F  F   +GLQ N+FN  + 
Sbjct: 567  FTESDGLSNNTVLNIEEDDHANLWLSTFNGLTKFNYRNNTFNKFYIENGLQCNEFNYNAS 626

Query: 637  CRTSVGQMYFGGINGITTFRPELLLDNPYTPPVVITKLQLFNKVVRPDDETGILTKNISE 696
                 GQ+ FGGI G   F P+ +++N   PP+ +T L+  N+ +  D      + ++ +
Sbjct: 627  AHLRSGQLLFGGIKGFNIFNPDSIMNNSAFPPLRLTDLRASNEPLISD---AAYSASLYD 683

Query: 697  TKSITLKSWQTAFSIEFVVSNYISGQHNTFAYKLEGYDKEWYYLTDSRTVSYSNLPQGTY 756
            TK I +   +   S ++    Y      +++Y LEG +  W  +  +R+ +YS L +GTY
Sbjct: 684  TKEIKIPYDRALLSFDYSALEYSFPSRISYSYYLEGLENNWNNVRTARSGNYSRLHEGTY 743

Query: 757  QFLVKAANSDGKWNPIPTALEIIVLPIWYKTWWALLIFFATFAGFITFVFRFFWMRKSME 816
               +++ N +G WNP    L+II+LP WY++WWA L + A  +  +    R+   +  + 
Sbjct: 744  VLHIRSTNGEGIWNPRQLTLKIIILPPWYRSWWAYLTYLAIISYLLYRFNRYKSNQVRLN 803

Query: 817  AQLEIERRDKEHQEEINQMKMRFFINISHELRTPLTLILTPLQEIINKISDRWTRNQLEY 876
             Q+E+   + E + E+N+ K+ FF +ISHE R+PLTLI+ P++E++         + L  
Sbjct: 804  YQIEMATANAEKERELNERKLSFFTHISHEFRSPLTLIINPVKELLYSSGKNIDVSDLSI 863

Query: 877  IQRNANRLLHLVNQLMDYRRAELGVFELKAKKGNAHQLIQDNFLFYDKLARHKKITYTLH 936
            +  NA RLL LV+QL+ +R+A+    +LK  K N   + +D FL +   AR K I  T  
Sbjct: 864  VYLNAKRLLSLVDQLLLFRKADHEEDDLKISKLNIVLVCKDVFLCFTSQARLKNIDITFE 923

Query: 937  SELEDKEVLFDANYLELIVNNLLSNAFKYTESGQSITVTLKEENGWLLLQVSDTGIGIPI 996
            S  E  E+  D   +E+++ N+LSNAFK+TE   SI V +++ +G + + + D G GI  
Sbjct: 924  SAEEYIEIFADREKIEIVLFNILSNAFKFTEKNGSIHVKVEDYDGRIAILIQDNGRGIHP 983

Query: 997  NKQGKIFERFYQIESEH----VGSGIGLSLVQRLIELHHGRIELDSEENKGSTFSVYLPQ 1052
                K+F++FYQ    +     G GIGL L ++ I  H G +   SE  +G+ F + L +
Sbjct: 984  EIGDKLFDKFYQAPKSYNVSVKGFGIGLYLAKKFITSHKGELTYHSEIGEGTVFRIELLK 1043

Query: 1053 DLSVYKPSELASNNEQNEE-EQVYSTNSKAMYFIDTEKVENESVESGD-----KKRGTIL 1106
             L       LA     +E+ E +      A    +      E  +SG+      ++  IL
Sbjct: 1044 GL-----EHLAGITVHHEDTEFIMPDLDLAEEEAEEPVTAMEQPDSGELDNLVSEQPAIL 1098

Query: 1107 IVEDNNEIRRYLSNGLADLFNTLEAGNGEEALEKLKDNEVDVIVTDVMMPVMDGIKLCKN 1166
            IV+DN   R+Y+     + F   EA +GE+ L K K    D+I++DV MPV DGI+LC  
Sbjct: 1099 IVDDNELFRQYIKRIFKESFIIYEAVDGEDGLIKAKKQLPDIIISDVTMPVKDGIQLCTE 1158

Query: 1167 VKQNIRTCHIPVIILSAKTDIKDQMEGLQMGADDYIPKPFSLAILTTKIQNMMRTRRRML 1226
            +K +    HIPVI+L++ T  + +++GL+ GA+DYI KPF   +LT +I N++++R  + 
Sbjct: 1159 IKADPAISHIPVILLTSSTSSEIKLKGLECGAEDYITKPFEAELLTARINNILKSRNSLQ 1218

Query: 1227 DKYAKSLEVEPEKITFNAMDEALLKRAMAIVEKNMDNIEFSTDEFAREMNMSRSNLHLKL 1286
              +  ++ ++ +    +   +  L + ++I E+++DN +F+T   A E+ MS S L+ K+
Sbjct: 1219 RYFYNAVTLQADNQKISPTFKEFLSKCISITERHLDNPDFNTKVLANEVGMSHSALYKKV 1278

Query: 1287 KAITGESTIDFIRKIRFNEAAKLLKDGRYTVAEVSTMVGFNTPSYFATSFKKYFGCLPTE 1346
            K+I+G+S  +FIR IR  +AA+LL      V E +   GFN   YF   F K F   P+E
Sbjct: 1279 KSISGKSINEFIRFIRLRKAAELLIQTDSRVNEAAFRAGFNNQKYFREQFTKLFEMTPSE 1338

Query: 1347 YIKK 1350
            YIKK
Sbjct: 1339 YIKK 1342