Pairwise Alignments

Query, 1047 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1111 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  525 bits (1353), Expect = e-153
 Identities = 342/1038 (32%), Positives = 522/1038 (50%), Gaps = 61/1038 (5%)

Query: 21   LIMSISLHAQNATVKGVIVDETDTPLIGATVQVKGTATGSITDFDGNYTIK-ANKGAVIT 79
            +++   L      VKG I+DE    L G T++VK  + G+ +  DG + +K   + A++ 
Sbjct: 120  ILLKTELLVPPGDVKGKILDEKGNTLPGVTIKVKNGSIGTTSGSDGEFILKNVPEDAILV 179

Query: 80   FSYIGYKTQEIKFTGQSPLNVKMIPDNQTLDEVVVVGYGTMKRSDLTGSVASIAAKDVEG 139
             SYIGY TQEIK   ++ + +K++P +  L++VVVVGYG  K+ DLTG+V++I  K +E 
Sbjct: 180  ISYIGYATQEIKADQKADMAIKLLPKSDNLNDVVVVGYGITKKKDLTGAVSTIDKKAIEN 239

Query: 140  FKTSSVAGALGGQIAGVQITSTDGTPGAGFSINIRGVGTLTGDSSPLYIVDGFEVDDIDY 199
               + V   L G+ AGVQ+TST+G PG+G SI IRG  ++ G + PLY++DG    DI+ 
Sbjct: 240  LPINRVDQMLQGKAAGVQVTSTNGAPGSGASIRIRGGNSINGTNEPLYVIDGLIGADINA 299

Query: 200  LSNSDIESIEVLKDASSSAIYGARAANGVVLITTKSGKTGRPTITYNGSASYRKISKKLD 259
            ++  DI S+ +LKDASS+AIYGAR +NGVV+ITTK G  G   I +      +++ K++ 
Sbjct: 300  VNPQDIASMSILKDASSTAIYGARGSNGVVIITTKKGAAGSDNINFEAYTGVQQLPKEIA 359

Query: 260  VLSPYEFVKLQGEVNSKYSDSYFKPGNDDNDIPYRYQSLDDYMGVKGVNWQDETFNPTWS 319
            +L+  ++ +L  E                N  P  Y +    +GV G NWQ E       
Sbjct: 360  MLNATQYAELANEAAVL------------NGTPILYPN-PQSLGV-GTNWQREITRTAPM 405

Query: 320  QDHSLSIMGGTDDSKYNASFSRYIENGIFKNSGFDKTTGKFRLDQKLSKSLSFNITVNYA 379
             +++L   GG+    Y  S +   + GI  NSGF     +++    LSK L  N+T    
Sbjct: 406  SNYTLGASGGSKGFNYFLSGNYNNQEGIILNSGF----SRYQFRTNLSKQLRDNVT---- 457

Query: 380  LTNRKGVGTSADSGRFNMLAQILSARPTGGLKLTDDELLDSAIDPE----MLESGESLAQ 435
                  VG   + GR       +S         T    + +  +P+      +  + L  
Sbjct: 458  ------VGAMINVGRTVTRNNTVSLGGPSQSSATAYSPIAAVYNPDGSFTSQKPNDPLYY 511

Query: 436  VNPVKQTESVTNTKRAEMWSGNGSISWQIIKGLTFKTAGTYNTTNNRTNIFYKDGSKEAY 495
             NPV Q     N      ++GN ++ W++IKGLTFK+      T N+ N +         
Sbjct: 512  DNPVAQGTVPYNRTINSYFTGNLTLDWELIKGLTFKSTFGSQMTFNKVNRYLPSSLPSRV 571

Query: 496  RNGQKPYGRTQMGRDVRWTNFNNLTW-KQKVKKHNYDVMLGHEVSFRSTEYLLGEAMDFP 554
             +G            +   N N L + K     HN++ ++G      S E    E   + 
Sbjct: 572  NSGNAGMANVDAANTIMVLNENTLNYNKDFGTDHNFNAVIGTSYQTESLERFNAEGQKYY 631

Query: 555  FDNLGNDYLGLGATPS-KVESSYSEKMLLSFFARGNYNYDNRYLLTATVRADGSTVFSNK 613
             D L  + LG G+  + K+ S  ++  + S+ AR NY Y N+YLLT T R+D S+ F+  
Sbjct: 632  ADPLLYNNLGAGSQATFKIGSGETKYAIFSYLARFNYTYKNKYLLTLTGRSDASSRFAAN 691

Query: 614  NKWGFFPSFSAAWRVSEEAFMKDVDWVSNFKVRLGWGIVGNDRISNYLSM-DLYEASKYG 672
            +K  FFP+ + AW  S E F+K+++   N K+R  +G  G+  I  Y S+  L     Y 
Sbjct: 692  HKRAFFPAAAIAWNASNEDFIKNLNVFDNLKIRASYGSNGSQGIDTYQSLASLRPVIGYL 751

Query: 673  VGNNTVTVLTPKQLKNANLKWEGSSTINLGVDLGFLDNRLNVTADFFVKNTKDLLLAQSL 732
            +G   +   T  +L N +L WE +   + G++   L  R+NV  D++ K T +LLL Q L
Sbjct: 752  IGGTNIVGFTSDRLPNPDLTWETTKQFDAGIEFSILKKRVNVELDYYNKVTSNLLLNQQL 811

Query: 733  AHVTGFDSQMQNIGKIQNKGIELSLNSTNIQTRDFSWQTNFNISFIKNTLKGLASGVESM 792
            A  +G+ S++ NIG I N G+EL++N+ NI    FSW T  NI+  +N +  L  GV++ 
Sbjct: 812  ATQSGYSSKVTNIGSINNHGLELAINTDNIVRDGFSWSTTLNIAANRNKVLDL-GGVQA- 869

Query: 793  YARSGFDSNFTAYDYIAT-----VGQSLGLIYGYEFDGVYQSSDFYTTPDNQLILKEGVT 847
                 FD+  T Y   +T     VGQ +G  +G  + G  ++     TP        G  
Sbjct: 870  -----FDNASTGYGTYSTISRLIVGQPVGTFWGTTYVGTKKTD----TPPTGTATSPG-- 918

Query: 848  NNARYGTVKPGVVKYKDQDGDGIITTNDRTVIGNAMPKWFGGITNTFDYKGIDFSFMLQF 907
            NN      + G   Y+D +GDG I   D  VIGN+ PK++GG+ NTF YK    +   Q 
Sbjct: 919  NN------RIGDALYQDLNGDGKIDVADYHVIGNSNPKFYGGLGNTFTYKKFSLNVFFQG 972

Query: 908  NYGNDIYNATRLYSTQSRNGRRNMLAEVADRWSPTNTSNLVPSQDGYIVNDVYSRFIEDG 967
            +YGN + N +  ++  S  G  N  A VADRW+  N S+ +P     +     SR + DG
Sbjct: 973  SYGNQVMNISDNFNNSSSPG-FNQYASVADRWTVNNQSSDIPRLPKTLDYIYSSRSVYDG 1031

Query: 968  SFLRLKNVTLGYTLPHKWTRKFHVSRLRLYATGQNLFCVSGYSGYDPEVNSASNTPMTPG 1027
            SFLRL+  T+G+ L         + +L +Y TG NL+  + Y  YDPEVNS        G
Sbjct: 1032 SFLRLRTATIGFNLTGSDMHVKWIQKLNVYVTGTNLWLWTKYPYYDPEVNSYGTNSTLRG 1091

Query: 1028 LDWGAYPKSRVFTFGIDL 1045
             D+  YP++R F  G++L
Sbjct: 1092 FDYTDYPQNRTFILGLNL 1109