Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 548 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 135/506 (26%), Positives = 195/506 (38%), Gaps = 92/506 (18%)

Query: 86  IIPTNSFPTTQSEVQQTWAALYTGIYRANDFLERISNKIGSYTTTDKKLATLYIAEARAL 145
           I+  NS P         W   Y+ I + N F++ +S    S     KK +   +AE + L
Sbjct: 94  IVNPNSIPGGDIGNIYGWTRNYSYIRKCNLFIKNVS--ASSLPEAFKKSS---LAEVKVL 148

Query: 146 RGMFYFELVRRFGNVVLMTSTQMSNQNPATYV-QSAPEKVYEYIEDDLLYACDILPYATD 204
           R  +Y  L   +G V ++T     +Q  A +  ++  ++  ++I  +   A   LP A  
Sbjct: 149 RAYYYQLLWMAYGGVPIITDVLSQDQGDAIFKPRNTADETMQFITKECADAYADLPDAPG 208

Query: 205 DQYRESNDYRFSKGAALGLLTKVYATWAGYPVKDESKW-EAAAKTARILVESGKHGLLKD 263
                    R  K  A+ L         G+     +KW +AAA   +I+ +   + L  D
Sbjct: 209 SG-------RIGKATAMVL--------KGWVELFANKWSDAAASNKKIIDDLKNYDLDPD 253

Query: 264 YEQLWKNTCNGTWDPTESLIEISFYS------------PTVSGNSDPVGRIGKWNGVKTT 311
           YE  +    N +    ES+    + +            PT +GN         W GV  T
Sbjct: 254 YEAFFLKKGNAS---KESIFYREYIATVKGGVIDGTCGPTFTGNDAETS----WGGVNPT 306

Query: 312 AIAGVRGSCAANVKVVHTFVLDWREDVSDIRRDLSIANYQYTDTKKSLWVAGASDTDESA 371
               V     AN KV+      +      + R+     YQ  +     W   +    ++A
Sbjct: 307 QEL-VDDYAMANGKVITDPSSGYDPQKPYVGREKRF--YQSINFDGCYWYNTSLSMRDNA 363

Query: 372 A-------EKDADPT-----KAQKNKQNYTPAKWDIQKYVTTNSFINNDKSNVNWYFLRY 419
           A       + DA  T     K   +K     A WD+              S+ N+   RY
Sbjct: 364 ANAIDLADKNDATQTGYYMRKRLNDKITLGAANWDV------------GTSDQNYNIFRY 411

Query: 420 ADVLLLYAEALNEWKHGPDAEAYNAINAVRRRGYGNPSNTSACDLPQGLDETSFREAVRK 479
           A+VLL YAEA NE   GPDA  YNAI  +R R  GN  N     LP GL +   R A+R+
Sbjct: 412 AEVLLNYAEAQNE-AVGPDASVYNAIGRIRTRA-GNLPN-----LPAGLSQAEMRTAIRR 464

Query: 480 ERSYELSFEGHRRQDLIRWGIYYKTVQATAKELGYWWEGTGSPNYSVATYTE-------- 531
           ER  EL+ E  R  DLIRW I    +      +        + N S  TYT         
Sbjct: 465 ERRIELALEDKRYWDLIRWRIAEVNLNKPLHGMKI------TTNGSNVTYTVVPAVGGDR 518

Query: 532 ---EGKHELFPIPQRDMDLCIQFNQN 554
                K+ LFPIPQ  +D   Q   N
Sbjct: 519 KFFASKNYLFPIPQNVIDQNKQIKGN 544