Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 551 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 133/557 (23%), Positives = 215/557 (38%), Gaps = 78/557 (14%)

Query: 38  NAEEAKDV-----LLGVYRTNTLDAMYGYYLSILFNLGTDISQVEGS---GNENFRIIPT 89
           NA   KDV     L+ V+  +  D     Y       G    ++ G+    NEN  +   
Sbjct: 36  NAYSEKDVWTDPKLVQVFVNSIYDQTVLAYQDSGLGWGAQTDELYGNFNWTNENLYVRGE 95

Query: 90  NSFPTTQSEVQQTWAALYTGIYRANDFLERISNKIGSYTTTDKKLATLYIAEARALRGMF 149
            +     S     W  +Y  I  +N F   I+   G           +Y      LR + 
Sbjct: 96  ATPDNQSSGSLNHWNKMYASIRYSNIFFANINQVTGGGDAVKTMKGEVYF-----LRALA 150

Query: 150 YFELVRRFGNVVLMTSTQMSNQNPATYVQSAPEKVYEYIEDDLLYACDILPYATDDQYRE 209
           YFEL++RFG V L+      N       ++   +  ++I  D+  A   LP      Y  
Sbjct: 151 YFELLKRFGGVPLIVKVYDVNDKSFNEKRATWNETKDFILADITEALKTLPTV----YAN 206

Query: 210 SNDY-RFSKGAALGLLTKVYATWAGYP----VKDESKWEAAAKTARILVESGKHGLLKDY 264
           SND  R + GAAL L +++   +A  P      D+  WE A   A+ +++          
Sbjct: 207 SNDKGRATAGAALALKSRLLL-YAASPYFNKTNDKKLWEDAKLAAKAVID-----FATPK 260

Query: 265 EQLWKNTCNGTWDPTESLIEISFYSPTVSGNSDPVG--RIGKWNGV-KTTAIAGVRGSCA 321
             L+ N  NGT++ T     + F++  +  +    G  R  ++N V +  +  G  G  A
Sbjct: 261 YALYGNAANGTYNKTY----LDFFNSEIIFSRVYSGLVRADRYNTVSRDLSPNGYNGYSA 316

Query: 322 ANV--KVVHTFVL------DWREDVSDIRRDLS---------IANYQYTDTKKSLWVAGA 364
            NV  ++V  F +       W          L+         +AN Q    + + +  G 
Sbjct: 317 YNVVQQMVDDFEMADGTKFSWSNPAQAKEPYLNREPRFYATILANNQQFKGRLTSFYEGG 376

Query: 365 SDTDESAAEK-DADPTKAQKNKQNYTPAKWDIQKYVTTNSFINNDKSNVNWYFLRYADVL 423
            D+ +S     +A  T+    K       W++Q Y  +            W   R +++ 
Sbjct: 377 DDSPQSPYSPWNASKTRYCVKKMVNEAFDWNVQDYDASQ-----------WVVFRLSEIY 425

Query: 424 LLYAEALNEWKHGPDAEAYNAINAVRRRGYGNPSNTSACDLPQGLDETSFREAVRKERSY 483
           L YAEA      G D EA N +N +R    G P+ + +  +          + +R ER  
Sbjct: 426 LNYAEACAAI--GEDGEALNYLNKIRTEKAGMPAVSGSGAV--------LMDKIRHERRI 475

Query: 484 ELSFEGHRRQDLIRWGIYYKTVQATAKELGYWWEGTGSPNYSVATYTEE---GKHELFPI 540
           EL FEGHR  D+ RWGI  +T    AK +    +  G+  Y++ T  E         +PI
Sbjct: 476 ELCFEGHRYFDIRRWGI-AETGSEDAKGVTITKQANGTFTYALMTVQERTWVPSFYFYPI 534

Query: 541 PQRDMDLCIQFNQNPKW 557
           P+ ++       QNP +
Sbjct: 535 PRSEIQKNPAIVQNPNY 551