Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 581 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  104 bits (260), Expect = 8e-27
 Identities = 128/529 (24%), Positives = 212/529 (40%), Gaps = 74/529 (13%)

Query: 71  TDISQVEGSGNENFRIIPTNSFPTTQSEV-----QQTWAALYTGIYRANDFLERISNKIG 125
           +D S +  SG    +I P  +  T QS+      +  W   Y  I R N FL  +     
Sbjct: 85  SDDSDIVWSG-ATAQIAPAFNSATFQSQADFSRFKNHWNNCYNNIRRVNVFLANVDRS-- 141

Query: 126 SYTTTDKKLATLYIAEARALRGMFYFELVRRFGNVVLMTSTQMSNQNPATYVQSAPEKVY 185
               +  + ATL + EAR LR  +Y+ L+R +  V ++     +  +     +S   +  
Sbjct: 142 --PISAARRATLKL-EARFLRAYYYWHLLRNYSGVPVIGDKVYAITDDFGLARSTFAETV 198

Query: 186 EYIEDDLLYACDILPYATDDQYRESNDY-RFSKGAALGLLTKVYA--------------- 229
            Y+  +L  AC  LP  T     +  D+ R +KGAALGL +KV                 
Sbjct: 199 NYVVSEL-DACAALPVTT-----QIEDFGRPTKGAALGLKSKVLLLAASPLFNGQNPGTG 252

Query: 230 ---TWAGYPVKDESKWEAAAKTARILVESGKHGLLKDYEQLWKNTCNGTWDPTESLIEIS 286
                AGY   D ++W+ AA  A+ +++ G + L+KD           T  P     ++ 
Sbjct: 253 ANKNLAGYENLDNNRWKLAADAAKAVMDMGIYNLVKD----------NTTAPGYGYYQMM 302

Query: 287 FYSPTVSGNSDPVGRIGKW-NGVKTTAIAGVRGSCAANVKVVHTFVLDWREDV------- 338
               T       +    +W  G       G +       ++V T+ +   +++       
Sbjct: 303 ITRNTPEHIFQVMKSTNRWYEGFLLPVSRGGQAYSYPTQELVDTYPMKNGKNIKEAGSGY 362

Query: 339 --SDIRRDLSIANYQYTDTKKSLWVAGASDTDESAAEKDADPTKAQKNKQNYTPAKWDIQ 396
             +D+ +D     Y       SLW+   ++T ++     A+           T   +  +
Sbjct: 363 VEADMYKDRDPRFYYSILYDGSLWLNNTTNT-KTVVNLYANAPGDGLGTSGSTKTGYLYR 421

Query: 397 KYVTTNSFIN-NDKSNVNWYFLRYADVLLLYAEALNEWKHGPDAEAYNAINAVRRRGYGN 455
           K+    +  N    +N+    +RYA++LL YAEALNE+  GP  E Y A+  +R R    
Sbjct: 422 KFCHEGAGGNFGISNNIGLVAIRYAEILLNYAEALNEFS-GPSTEVYQAVEQIRER---- 476

Query: 456 PSNTSACDLPQGLDETSFREAVRKERSYELSF-EGHRRQDLIRWGIYYKTVQATAKELGY 514
            +      LP  L +   RE +R ER  EL++ E  R  D+ RW +    +   A   G 
Sbjct: 477 -AGLVPFQLPSQLSKEQMREVIRNERRVELTYEEAIRFFDIKRWKLAETLINGPAN--GM 533

Query: 515 WWEGTGSP------NYSVATYTEEGKHELFPIPQRDMDLCIQFNQNPKW 557
            W  +GS       ++    +T    +  FPIPQ +++      QNP W
Sbjct: 534 RWTRSGSTVTGARFSFETRRFTNPQMY-YFPIPQSEINKSTVLIQNPGW 581