Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 580 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  106 bits (264), Expect = 3e-27
 Identities = 128/496 (25%), Positives = 198/496 (39%), Gaps = 55/496 (11%)

Query: 97  SEVQQTWAALYTGIYRANDFLERISN----KIGSYTTTDKKLATLYIAEARALRGMFYFE 152
           +++   W  +Y GI   N  L RI         S    D K       E R LR + YFE
Sbjct: 104 NDIYGVWKLMYAGIAVQNKMLARIGEVPLPPNASVPVFDAKRVE---GEMRFLRALSYFE 160

Query: 153 LVRRFGNVVLMTSTQMSNQNPATYVQSAPEKVYEYIEDDLLYACDILPYATDDQYRESND 212
           L +RFG V ++        +     +S   +V  +I  DL  A  I    TD +Y  SN 
Sbjct: 161 LTKRFGGVPIVDKVY-GVYDDINLPRSTFAQVTAFILKDLEVA--ITKLGTDTEYGPSNY 217

Query: 213 YRFSKGAALGLLTKVY---ATWAGYPVKDESKWEAAAKTARILVESGKHGLLKDYEQLWK 269
            R + GAAL L  +V    A+    P  D+SKW+AAA  A  +++ G +GL +    L  
Sbjct: 218 GRPTIGAALALKARVLLYAASPLNNPGNDKSKWQAAADAAAEVMK-GANGLARQTYAL-- 274

Query: 270 NTCNGTWDPTESLIEISFYSPTVSGNSDPVGRIGKWNGVKTTAIAGVRGSCAANVKVVHT 329
                T+    +L   + Y         P+      +   + A  G +G        V  
Sbjct: 275 ---QATYGDLLNLPNSTEYIMIRIKGPTPLAGEMMQDFSMSPASGGAQGQMNPTQNHVDM 331

Query: 330 FVLDWREDVSDI------------RRDLSIANYQYTDTKKSLWVAGASDTDESAAEKDAD 377
           + +   + ++D             R      N  Y D      +A      E    KDAD
Sbjct: 332 YEMANGKSITDPTSGYDPQKPYLNREPRFYNNIIYND------LAWQGRKIEMWTTKDAD 385

Query: 378 PT----KAQKNKQNYTPAKWDIQKY-VTTNSFINNDKSNVNWYFLRYADVLLLYAEALNE 432
                 +       YT  ++  +KY       +    + +N+ + RYA+++L YAEA NE
Sbjct: 386 NNTIFGRDYSTTITYTATRYYCKKYWPEVYRTVGGSTTLLNYIYFRYAEMMLNYAEAQNE 445

Query: 433 WKHGP-DAEAYNAINAVRRR-GYGNPSNTSACDLPQGLDETSFREAVRKERSYELSFEGH 490
             +   DA  YN +  +R+R G    + T    L   + +   R  +R ER+ EL+FE H
Sbjct: 446 ANYTVNDASVYNVLVDIRKRAGIAKGTGTYGYGLKDNMTQDEMRTVIRHERAIELAFEDH 505

Query: 491 RRQDLIRWGIYYKTVQATAKELGYWWEGTGSPNYS--------VATYTEEGKHELFPIPQ 542
           R  D++RW I  +T+    K +       G+  Y+          T+TE     L+PIP+
Sbjct: 506 RWYDIMRWKIGAQTIAVPMKGMDVVKNSNGTFTYTPIVLGPTFQKTWTE--AQNLYPIPR 563

Query: 543 RDMDLCI-QFNQNPKW 557
            ++        QNP W
Sbjct: 564 AEVYKSKGVLTQNPGW 579