Pairwise Alignments

Query, 557 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 565 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 95.5 bits (236), Expect = 5e-24
 Identities = 156/619 (25%), Positives = 229/619 (36%), Gaps = 120/619 (19%)

Query: 1   MKKIIYYIAMSVMCLLPFSCS---LEEETRTEVEKKNYMNNAEEAKDVLLGVYR------ 51
           MKK   YI  +++     SC    L     + V+ K    N  +    L  +Y       
Sbjct: 1   MKKAYLYILAAIVIANVVSCKKDFLSSPPVSVVDAKAIFGNPLQTAGFLANIYSELSGSP 60

Query: 52  ---------TNTLD---AMYGYYLSILFNLGTDISQVEGSGNENFRIIPTNSFPTTQSEV 99
                    TN  D   A Y YY S   N+G+      GS N +   +  N         
Sbjct: 61  DQFGAGTGFTNMCDEAEAGYAYYASNASNVGS----FNGSNNPDNASLNDN--------- 107

Query: 100 QQTWAALYTGIYRANDFLERISNKIGSYTTTDKKLATLYIAEARALRGMFYFELVRRFGN 159
                  Y  I + N  L   +NK     T    L   YIAEAR LR  FY EL++RFG 
Sbjct: 108 -------YRKIRKCNVML---ANK--DLMTFTPALKDQYIAEARFLRAFFYTELLKRFGG 155

Query: 160 VVLMTSTQMSNQNPATYVQSAPEK---------VYEYIEDDLLYACDILPYATDDQYRES 210
           + ++TS     Q      Q+  +K           ++I   L  A  +LP++        
Sbjct: 156 MPIITSPIDYEQIKDFDAQAELKKGIKRNTYAECVDFIVKQLDSAATVLPWSPPSDLERG 215

Query: 211 NDYRFSKGAALGLLTKVYATWA------------GYPVKDESKWEAAAKTARILVESGKH 258
              R +  A   L  +V    A            GYP  D ++W+ A   AR        
Sbjct: 216 ---RVTAAACAALKARVLLVAASPLFNGSGNELTGYPTADPARWQLALDAARSFFTKNTA 272

Query: 259 GLLKDYEQLWKNTCNGTWDP--TESLI----EISFY---SPTVSGNSDPV-----GRIGK 304
           G        W +   G +D   TES      EI +Y   S   +GN DP       R+G 
Sbjct: 273 GAN------WYSLYAGGFDKLFTESRDPNNREIIWYKQSSGVTTGNFDPTYFNPPNRLGG 326

Query: 305 WNGVKTTAIAGVRGSCAANVKVVHTFVLDWREDVSDIRRDLSIANYQYTDTKKSLWVAGA 364
           + G   +     +    + +  ++     + E    + RD  +A     +    LW    
Sbjct: 327 FTGYDVSLNLVDKFEMKSGL-AINDAGSGYNEQQWWLNRDPRLAFSVLRNG--DLW---R 380

Query: 365 SDTDESAAEKDADPTKAQKNKQNYTPAKWDIQKY--VTTNSFINNDKSNV--NWYFLRYA 420
            +T E  A           + +N     W  Q    +T   F   D   +   ++++R A
Sbjct: 381 GNTMEFWAR--------DVSNKNLPGLDWGSQNQTGMTIKKFQRPDNGTIVTKYHYIRLA 432

Query: 421 DVLLLYAEALNEWKHGPDAEAYNAINAVRRRGYGNPSNTSACDLPQGLDETSFREAVRKE 480
           DV L+ AEA NE   GP AE Y AIN VR R     +      LP GL +   R  ++ E
Sbjct: 433 DVYLMLAEAANE-VGGPTAEVYTAINTVRNR-----ATVLMPPLPAGLSKDQMRLRIQNE 486

Query: 481 RSYELSFEGHRRQDLIRWGIYYKTVQATAKELGYWWEGTGSP----NYSVATYTEEGKHE 536
           R+ EL+FE  R  D+ RW I  +T     +  G+  E  GS      Y++     + +  
Sbjct: 487 RAVELAFENQRYFDVRRWKIAEQTDNGPFQ--GFVIEKNGSTITHNRYTLEVRKFQPRMY 544

Query: 537 LFPIPQRDMDLCIQFNQNP 555
           L+PIP  ++       QNP
Sbjct: 545 LYPIPDVEIFKGANIVQNP 563