Pairwise Alignments

Query, 299 a.a., mobilization protein BmgA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 755 a.a., TraI DNA relaxase from Marinobacter adhaerens HP15

 Score = 48.1 bits (113), Expect = 6e-10
 Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 24/252 (9%)

Query: 8   RTDFGGIVNYANDQKNKKKSATLL-AHEGVCTISNKAIADFFQIQASMRPKVKSPVKHVS 66
           ++DF G+V Y  D+++K +   L+ A           I +    Q            H+ 
Sbjct: 6   KSDFAGLVKYITDEQSKTERLGLVNATNCEADTMQAVIGEVLATQQGNTRAKGDKTYHLI 65

Query: 67  LAFSSQDISRFPDNEEGDALMVEIAKKWMEQMGIRNTQYIIARHHDTKHPHCHLVFNRID 126
           ++F + +       +  D ++  + ++    +G  + Q + A HHDT + H H+  N+I 
Sbjct: 66  VSFPAGE-------KPEDDVLKAVEERICAGLGYADHQRVSAVHHDTDNVHIHIAINKIH 118

Query: 127 NEGNLISDSNERIRN-AKVCRALTKEYGFYFAPKNSKARNKSRLRPHQLRKYN------- 178
              N + +  +  R    +C AL  EYG      +   ++ S+ R   + ++        
Sbjct: 119 PTRNTMHEPYQDYRTLGGLCDALEDEYGLQ-KDNHQGRKSVSQGRASDMERHAGIESLVS 177

Query: 179 -LRSSVLDAQVNSRSWNDFISTLKGQGIDMRFNHAENSDKIRGISFCMDEFSIAGSKLDR 237
            ++   L+    +++W +    +   G+++R     N   I       D   +  S + R
Sbjct: 178 WIKRECLEEIKTAKTWEELHQVMSDNGLEIR--QRANGFVIES----EDGTQVKASTVAR 231

Query: 238 DLSFNNLCTMLG 249
           DLS   L   LG
Sbjct: 232 DLSKPKLEARLG 243