Pairwise Alignments

Query, 189 a.a., peptidyl-tRNA hydrolase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 195 a.a., peptidyl-tRNA hydrolase (RefSeq) from Shewanella loihica PV-4

 Score =  102 bits (255), Expect = 3e-27
 Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 2/165 (1%)

Query: 5   LIVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFIDGRY-GFTTSFSIKGRQLILLKP 63
           LIVGL N G +Y +TRHN G   V  LAR+       D +Y G T   ++ G+ + LL P
Sbjct: 6   LIVGLANPGDKYEQTRHNAGAWYVNELARVCGVSLVADSKYYGLTARATLYGKDVRLLIP 65

Query: 64  STFMNLSGLAVRYWMQKENIPLENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAIL 123
           +TFMNLSG +V        I  + +L+  D+L +P G  + K  G   GHNGLK I A L
Sbjct: 66  TTFMNLSGKSVGALANFFRIAPDEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAKL 125

Query: 124 GT-QNYARLRFGIGNDFPKGGQIDYVLGHFTDEDRKTMDERLETA 167
              + + RLR GIG+   K    +YVLG     +++ ++E ++ A
Sbjct: 126 ANDKGFYRLRIGIGHPGDKSMVSNYVLGKAPQTEQRLIEEVIDEA 170