Pairwise Alignments

Query, 353 a.a., DNA damage-inducible protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 354 a.a., DNA-directed DNA polymerase from Pseudomonas syringae pv. syringae B728a

 Score =  262 bits (670), Expect = 9e-75
 Identities = 150/331 (45%), Positives = 206/331 (62%), Gaps = 10/331 (3%)

Query: 2   DAFYASVEQRDHPELRGKPLAVG-HAEERGVVAAASYEARRYGVRSAMSSQKAKRLCPQL 60
           D FYA++E RD P+L GKPLAVG  AE RGV+A  +YEAR YGVRSAMSS+ A +LCP L
Sbjct: 12  DCFYAAIEMRDEPDLAGKPLAVGGSAERRGVIATCNYEARAYGVRSAMSSRHALKLCPDL 71

Query: 61  IFVSGRMDVYKSVSRQIHEIFHEYTDIIEPLSLDEAFLDVTENKKGISLAVDIAKEIKLR 120
             V  RMD YK  SR+IH IF +YTD+IEPLSLDEAFLDV+E       A  IA++I+ R
Sbjct: 72  TIVKPRMDAYKEASREIHTIFRDYTDLIEPLSLDEAFLDVSEAGHFSGSATRIAQDIRRR 131

Query: 121 IREQLNLVASAGVSYNKFLAKIASDYRKPDGLCTIHPDQALDFIAGLPIESFWGVGPVTA 180
           +  QL++  SAGV+ NKFLAKIASD++KP+GL  I PDQ  +F+A LP+    GVG VTA
Sbjct: 132 VSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEEFVASLPVTKLHGVGKVTA 191

Query: 181 KKMHLLGIHNGLQLRKCSLEMLTAHFGKVGALYYECSRGIDERPVEAVRIRKSIGCERTL 240
            K+  LGI +   LR  S   L   FG  G   +  + GID+RPV+    R+S+  E T 
Sbjct: 192 DKLGRLGIVDCADLRSRSKLALVREFGSFGERLWSLAHGIDDRPVQNDSRRQSVSVENTY 251

Query: 241 ERDISVHSSVIIELYHVAVELIERLQRKE--FKGNTLTLKIKFHDFSQIT-RSITQSQEL 297
           + D+   ++ + +L  +   L  R+ R E  ++     +K+KFHDF+Q T       ++L
Sbjct: 252 DTDLPDLAACLEKLPDLLETLSGRMARMEGQYRPGKPFVKVKFHDFTQTTLEQSGAGRDL 311

Query: 298 YTLDRILPLAKELLKSVEYEQHPIRLIGLSV 328
            + +++      L ++      P+RL+G+ V
Sbjct: 312 GSYEQL------LAQAFARGGKPVRLLGIGV 336