Pairwise Alignments

Query, 316 a.a., conserved hypothetical protein, with a Metallo-beta-lactamase superfamily domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 393 a.a., Ribonuclease Z from Synechococcus elongatus PCC 7942

 Score =  186 bits (471), Expect = 1e-51
 Identities = 100/302 (33%), Positives = 164/302 (54%), Gaps = 11/302 (3%)

Query: 5   ELHILGCGSALPTTRHFATSQVVNL--REKLFMIDCGEGAQMQLRRSRLKFSRLNHIFIS 62
           ++  LG  S +PT     ++  + L  R ++++ DCGEG Q Q  RS L+ S+L  IF++
Sbjct: 2   QVTFLGTSSGVPTRSRNVSAVALRLPQRAEVWLFDCGEGTQHQFLRSELRISQLRRIFVT 61

Query: 63  HLHGDHCFGLLGLISTFGLLGRTADLHIHSPKGLEELFAPLLSFFCKTLAYKVFFHEFET 122
           H+HGDH FGL+GL+++ GL G    + ++ PK L +            + Y +   +  T
Sbjct: 62  HMHGDHVFGLMGLLASVGLAGNPERIDLYGPKPLRDYLQACAQHSRTHINYPL---QIAT 118

Query: 123 KEPTLIYDDRSVAVTTIPLRHRIPCCGFLFEEKQRPNHIIRDMVDFYKVPVYEL-NRIKN 181
            +P +IY+D  + V+  PL HR+P  G+  +E+ RP     +      +P   +  ++K+
Sbjct: 119 VQPGVIYEDAEIVVSCAPLHHRVPAFGYRIQERDRPGRFDVEKARSLGIPPGPIYKQLKD 178

Query: 182 GADFVTPEGEVIPNHRLTRPSAPARKYAYCSDTIYRPEIVEQIKGIDLLFHEATFAQTEQ 241
           G      +G  I   +L  P+   R   YC+DTI+    +   +  D+L HE+TF+  ++
Sbjct: 179 GETVTLEDGRQIDGRQLCGPTERGRSMVYCTDTIFCESAIALAQDADVLIHESTFSDRDR 238

Query: 242 VRAKETHHTTAAQAAQIALNAEVKQLVIGHFSARY-----EDESVLLNEAAAIFPQTVLA 296
             A++  H TA  AA++A  A V+QL++ HFS RY     +    LL EA AIFPQT+LA
Sbjct: 239 EMAEQRLHATATMAAEVAKQAGVRQLILTHFSPRYAPGNEQTLDDLLAEAQAIFPQTMLA 298

Query: 297 RE 298
           ++
Sbjct: 299 KD 300