Pairwise Alignments

Query, 312 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1589 a.a., DNA helicase from Pseudomonas fluorescens FW300-N2E3

 Score =  120 bits (300), Expect = 3e-31
 Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 30/324 (9%)

Query: 1    MRSLGYTVHTDIGCSGYKIDIGIVDTQNPSNYQLGIICDGKNYRRTKTVRDREIVQNNVL 60
            +R L Y V   +G +GY ID+ + D + P  Y L + CDG  Y  +++ RDR+ ++  VL
Sbjct: 1278 LRDLDYQVEPQVGTAGYFIDLAVRDPEFPGRYVLAVECDGAAYHSSRSARDRDRLRQGVL 1337

Query: 61   KALGWNICRIWTMDWWEKPDEVIASIQTAIVQGMKAPKPVVVQEKQEKEEERVQEKPMQL 120
            + LGWN  RIW+ DW+  P + I    T  V  ++A +  +   +     E + E   ++
Sbjct: 1338 EGLGWNFHRIWSTDWFRNPKQEI----TRTVAAIEAAREHIANRRSVSVTETLIEPQHEI 1393

Query: 121  --KSAYTSPSPIFVQNYNSTKVSSYHYASDDIFAAENKP-ILIAQIRKIVENEAPISKAL 177
                      PI  Q Y   ++S+    S  +   +++P  L+  IR +V+ E+P+    
Sbjct: 1394 IRDETIAEVEPIASQPYEKARLSA---VSTQVELHQHQPEHLLRLIRSVVDVESPVHSVE 1450

Query: 178  LGKKILSEWGISRLGPRIDAYLETIFDT-----------LHLYRIEHDGLVFCWKDEAQY 226
            + ++++  +G++R G RI A +E                  L+ +E+  +V   +  A +
Sbjct: 1451 VTRRLMEAFGVTRQGSRITAAVENAIGMGIKQRHFLRRGEFLHHVENRPVVI--RSRAHW 1508

Query: 227  RSYTEYRPDSDRDAADLPPEETANAIRQILTDSISLPLPDLIKACAQIFGFARMGSNIEA 286
             S       ++R    + PEE   A+ +I+    S+   D I    ++ GF R  + + A
Sbjct: 1509 ES-------AERKLEWVAPEELDQALIEIIISGFSMSHDDAISGALRLLGFGRATAKVTA 1561

Query: 287  SMLRGIQEAVKKNYARVENGRATI 310
             +   I++  +     +  GR  +
Sbjct: 1562 PLKERIEQLTRDRRLELREGRLVV 1585