Pairwise Alignments

Query, 312 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1861 a.a., putative superfamily I DNA and RNA helicase protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  102 bits (253), Expect = 9e-26
 Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 28/313 (8%)

Query: 1    MRSLGYTVHTDIGCSGYKIDIGIVDTQNPSNYQLGIICDGKNYRRTKTVRDREIVQNNVL 60
            +++ GY VH  +G +G+ ID+ + D + P  Y LGI CDG +Y   ++ RDR+ ++ +VL
Sbjct: 1542 LQARGYQVHAQVGLAGFFIDLAVADAERPGRYLLGIECDGASYHDARSARDRDRLRQSVL 1601

Query: 61   KALGWNICRIWTMDWWEKPDE----VIASIQ---------TAIVQGMKAPKPVVVQEKQE 107
            ++ GW I R+W+ DW+++P E    +IA I+         TA       P  +V  E+++
Sbjct: 1602 ESHGWIIHRVWSTDWFQRPAEQLELIIARIEAAKEEYDAKTANRATRAVPIEIVAVERED 1661

Query: 108  KEEERVQEKPMQLKSAYTSPSPIFVQNYNSTKVSSYHYASDDIFAAENKPILIAQIRKIV 167
              E  +     ++ S+           Y    +    Y +D++       IL   +   V
Sbjct: 1662 VTEIGLVPTDEEISSSGA--------EYVEAVLQRPTYRTDELHETPT-GILTNLVVDAV 1712

Query: 168  ENEAPISKALLGKKILSEWGISRLGPRI----DAYLETIFDTLHLYRIEHDGLVFCWKDE 223
              E P+    +  +    WG+ R G RI    +A ++    T  + R+     +    D 
Sbjct: 1713 SVEGPVHVDEVVHRFRDAWGLKRAGGRIHEAVEAAVKVAVKTGRVERVAQ--FLSIPNDP 1770

Query: 224  AQYRSYTEYRPDSDRDAADLPPEETANAIRQILTDSISLPLPDLIKACAQIFGFARMGSN 283
             + R  +  R  + R A  LPP E   AI  I  ++       ++ A +++ G     + 
Sbjct: 1771 VRIRDRSATRSINLRRADMLPPAEIDAAILDIARNNFGATRDQMVLATSRMLGIKVTSAA 1830

Query: 284  IEASMLRGIQEAV 296
            + A + + I EAV
Sbjct: 1831 VRAVIEQQIDEAV 1843