Pairwise Alignments

Query, 312 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1559 a.a., putative DNA helicase related protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  104 bits (259), Expect = 2e-26
 Identities = 80/308 (25%), Positives = 141/308 (45%), Gaps = 27/308 (8%)

Query: 1    MRSLGYTVHTDIGCSGYKIDIGIVDTQNPSNYQLGIICDGKNYRRTKTVRDREIVQNNVL 60
            +RS G+     +G +G++IDIG+     P  Y L + CDG  Y      R+R+ ++  +L
Sbjct: 1261 IRSEGFLADAQVGSAGFRIDIGVRHPDQPGQYLLAVECDGAAYHAALWARERDRLRQGIL 1320

Query: 61   KALGWNICRIWTMDWWEKPDEVIASIQTAIVQGMKAPKPVVVQEKQEK-------EEERV 113
            + LGW   RIW+ DW+      +  ++ AIV+  +A    V      +        EE  
Sbjct: 1321 ENLGWRFHRIWSTDWFHHRSREVEKLRAAIVEAREALNDGVQVRGANQGATNIPASEEVS 1380

Query: 114  QEKPMQLKSAYTS-PSPIFVQNYNSTKVSSYHYASDDIFAAENKPI--LIAQIRKIVENE 170
            + +P  +   + +  +P +V+   S + S               P+  L   + +IV  E
Sbjct: 1381 EHQPETIDIGHLALTAPPYVRAELSVRSS---------VEPHEAPVQQLSELVSRIVAIE 1431

Query: 171  APISKALLGKKILSEWGISRLGPRI-DAYLETIFDTLHLYR---IEHDGLVFCWKDEAQY 226
             PI    + ++I + +G SR G RI DA    +   L L R   +  DG       +A+ 
Sbjct: 1432 GPIHADEIARRIAAAFGRSRTGNRIADAASRAV--RLALQRDTELRRDGAFLMTSAQAET 1489

Query: 227  RSYTEYRPDSDR--DAADLPPEETANAIRQILTDSISLPLPDLIKACAQIFGFARMGSNI 284
                +   ++     A  LPP E A A + +L +S  +   DL++A A++FGF R+G+++
Sbjct: 1490 PPVRDRSSETGTVLKAEYLPPSEIAAAAKLVLKESGEVGQDDLVRAVARLFGFQRVGTDL 1549

Query: 285  EASMLRGI 292
              ++  G+
Sbjct: 1550 SEAIRNGL 1557