Pairwise Alignments

Query, 216 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 377 a.a., Ribonuclease D from Pseudomonas syringae pv. syringae B728a

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 24  IHVIQSEAETEKAVAYLQSQPILGIDSETRPSFTKGQSHK--VALLQISSDECCFLFRLN 81
           IH I+ +    +  A  QS P + +D+E    F +  +     ALLQI   +  +L    
Sbjct: 5   IHWIRDDDSLARHCAQWQSLPFVALDTE----FMRVDTFYPIAALLQIGDGQSAWLIDPL 60

Query: 82  MTGLTQPLVDLLENPAVIKVGLSLKDDFMMLHKRAPFTQQSCIELQDYVRQFGIQDKSLQ 141
           +    +PL  LLENP VIKV  +  +D  +L +    T    + L D        +    
Sbjct: 61  LINDWRPLSALLENPDVIKVVHACSEDLEVLLR---LTGSLPVPLFDTQLAAAYLNLGFS 117

Query: 142 KIYAILFKE----KISKSQRLSNWEADVLSDGQKQYAATDAWACLNIYNLLQ 189
             Y+ L +E     + K +  S+W    LS+ Q  YAA DA     ++ +L+
Sbjct: 118 MGYSRLVQEVLDIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAELFTILR 169