Pairwise Alignments
Query, 1431 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1365 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5
Score = 555 bits (1430), Expect = e-161
Identities = 407/1394 (29%), Positives = 660/1394 (47%), Gaps = 178/1394 (12%)
Query: 133 IASDQSIWLWDNNNGCRRVVYQDGQFSSQAYKKELGNLSS--DKVLFVYESNDSPGHVWI 190
I D++ ++W G R + + + + Y NL+S D V+ S DS G +W+
Sbjct: 45 ITQDKNQFIW---MGTRHGLNRYDGYRFKIYNNSSDNLNSLSDNVINTLLS-DSKGRLWV 100
Query: 191 GTKQGLWKYHDGKLEAMDTQGESWEHIFSYDQYTCIITGKKEIYRHSLSNNRLEKIASLT 250
GT+ GL Y+D S + FS D CI Y N + L
Sbjct: 101 GTENGLNIYNDKNDHFYRINKRSSANSFSCDSVECI-------YEDPQKNIWVGTYNGLN 153
Query: 251 ELGDTGVITGSLRLQHQWVMFTATGSYILDPVTGKLRRFSRLNIKNG-----NVTRDNKG 305
+ DT + K F + N K+ ++ +D K
Sbjct: 154 LVIDT------------------------EKQIFKKFLFDKPNYKSALNCIFSIFKDEKQ 189
Query: 306 NAWVHNYTGNVWYVNTSTGDIKHFQFLSSEHLGYIDVERY---SIIHDSRDIIWITTYGN 362
N WV Y G V HF+ + SI+ D + +W+ TY N
Sbjct: 190 NLWVGTYNGLVRIYQVKGK--YHFEIFRHNPNNKNSISSNAVKSIVIDKQKRLWLGTY-N 246
Query: 363 GLFAYDLNTGDLQHFTFEVSHSSHINSNYLQYIIEDRSGGIWVSSEFSGLSHLEILNK-- 420
GL +D + + + + I +N ++ + D+ G IW+ ++ GLS L+ +
Sbjct: 247 GLNLFDYEHKTFKRYQTSATDPNSIINNDIRKLTRDKVGNIWIGTQ-EGLSILDPNTRKF 305
Query: 421 GTLRIYPNGEDASDRSNTIRMLLRGKNGNVYMANRMGTLYE-----YDAD-----LKNIL 470
R P D + N+I + + NG+VY+ GT Y+ Y + +N
Sbjct: 306 SNYRYDPEQPDGLSQ-NSIHSIFQDLNGSVYL----GTYYKGANVVYPSATPFTVFRNSK 360
Query: 471 RREKFTHNVYS-MCEDNEGQLWLGMRGIGLRI-----GADQWYRYNSKDNNSLSNDNVYL 524
R+ + ++ S M ED LW+G G GL +Y+ NN L+++ +
Sbjct: 361 TRQGLSSDIVSAMVEDQNHNLWIGTEGGGLNYVNRSNHTFTYYKLEPNSNNGLNSNLIKT 420
Query: 525 IYRDRKGRMWIGTFGGGLNLAVKTGNGYQ------------------------------- 553
+ D+ G++ +GT GGL L G+ ++
Sbjct: 421 LCLDKTGQLLVGTHRGGLYLFNAAGHNFKKIINVKNKKNNPGGSEVIAITEDSDGTVWVG 480
Query: 554 -------------------FKHFFQDSYGEKRVRVIQEDRNGMMWVGTNNGIYIFHPDSL 594
K + + K ++VI ED+ +W+GT G+Y +HP
Sbjct: 481 SRDGLSTLKKTNGLYAATTVKSPLEQNLRNKYIQVIFEDKAKNLWIGTMAGLYAYHP--- 537
Query: 595 INSPKNYVLYNHVNETFP----SNEIRCLVNDHEGNMWIGTTGAGFAICYPGNDYQHLTF 650
+ K Y + N+T P S+ I C+V GN+ +GT+ G +I D + F
Sbjct: 538 --ATKRITAY-YKNKTKPGSLNSDHINCIVQIQNGNICVGTSFGGLSIF----DNKSRKF 590
Query: 651 DCYSIKDGLPNGVIQSIVEDQDNKMWIATEYGISRFTLATKQIENYYFSSHTLGNVYSEN 710
Y+ KDGLPN + I+ED++N +WI+T+ G+S+ T + NY S GN ++
Sbjct: 591 KNYNEKDGLPNSNVLGIIEDEENNLWISTDKGLSKLITKTGRFINYTKSDGLAGNDFNIR 650
Query: 711 TACINADGRLLFGTNYGLVVLDANKVE--NMEKLASTVFTGLHINGAHMLPGMDDSPLNE 768
+ ++ G L FG GL ++++ + +A FT L + + D LNE
Sbjct: 651 SFLKDSRGELFFGGYDGLTAFYPSQIDINSNRNVAPITFTELKLFDKPVAVNAPDGLLNE 710
Query: 769 TMSYTGQLNLKHYQNSFVIAFSTFNFLSGA-SKYSYRMPPYDSEW---SIPSAQNLATYR 824
+ Q+ KH N+F + F+ N++ + Y Y + + +W +PS TY
Sbjct: 711 DIKSIKQITFKHDNNNFSLDFALLNYIKPEKNSYRYILKGHSKDWVKTDVPSV----TYS 766
Query: 825 NLPPGKYQLQVKACNVAGVWGEE-STMEIVIAPPFWQTTWAYLIYLV-FIGIVCYFSFHI 882
+LP G Y V N G G + ++++I + PPFW T WAYLIYL F G++ +
Sbjct: 767 DLPAGNYTFIVTGNNNDGNPGNKPASLKITVLPPFWATWWAYLIYLACFSGLL-----FL 821
Query: 883 IRKFNRLRNRIAVEKQLTEYKLEFFTNISHEFRTPLTLIQGALNKLINIENPPKEMQRPL 942
I ++ +R + + + + KL FFT ++HE RTPLTLI G L L E+ R +
Sbjct: 822 IVRYLFVRALLKRTEDIQKMKLNFFTYVAHEIRTPLTLILGPLENLSKQYQTDTELNRQI 881
Query: 943 KTMDKSTQRMLRLINQLLEFRKMQKNKLALSLEETDVIAFLYEIFLSFKDTSESKNIDFS 1002
+ + R++RLI +L++FRK + L L + E +++ F+ EIF+SF +++ +I +
Sbjct: 882 IPIKNNANRLMRLITELMDFRKAETGHLTLHVTEDNIVDFINEIFISFSHLAQTNDIQYE 941
Query: 1003 FEPSQPAYKMFIDKGNLDKVTYNLLSNAFKYTPSNGKIIFKIDIQEDKQQLRIQVIDNGI 1062
F Q +F DK L+KV +NLLSNAFK+ GKI + + + ++ I + DNG+
Sbjct: 942 FVRGQENISLFFDKRQLEKVLFNLLSNAFKFCDKGGKI--SVTLVDMDNEVAISIADNGL 999
Query: 1063 GIPKEKRSELFKRFMQSSFSHSSV---GVGLHLTHELVQVHKGNISYDEN-----EGGGS 1114
GIP E LF + Q HS+ G+GL L+ +V+ HKG+I+ + E G +
Sbjct: 1000 GIPAESLKNLFSDYFQVDEQHSNQIGSGIGLALSKAIVEEHKGHIAVESTPAENGERGFT 1059
Query: 1115 VFTVLLPTNSDIYQE------KDFLIPNQLLTEEEEQHSKDFLRNETSEDTFQPPVDPLN 1168
FTV L ++ KD+ + T++ E+ + L+ E D L+
Sbjct: 1060 NFTVRLKKGKSHFKTAIFDGAKDYPTHPNIYTQQPEKEL-NILKPEKETD--------LS 1110
Query: 1169 KRKVLIIEDDTDIREFLREEIGVYFEVEVAADGTSGFEKASTYDADLIVCDVLMPGMNGF 1228
+L++ED+++IR+ + IG ++ V + +G G+E A DLI+CD++MP M+G
Sbjct: 1111 TETILVVEDNSEIRQLIASLIGGHYLVAESENGLMGWETAVETLPDLIICDIMMPIMDGI 1170
Query: 1229 EVTRKLKNEFTTSHIPIILLTALNIEEKYQEGIESGADAYITKPFNVSLLLARIFKLIEL 1288
E+ R+LK + TSHIP+I+LTA + G+E+GADAYITKPF+ LLL + L+
Sbjct: 1171 ELCRRLKEDERTSHIPVIILTARSSHIHQVSGLETGADAYITKPFSPELLLLNVRNLLMS 1230
Query: 1289 RDKLRQKYSNEPGLAHSIICTNDKDQKFSVKLNEVLNEHMTDTDFSVNDFAGIMGLGRTV 1348
R +RQK+ L + N D+ F +KL + ++EH+TD DF V++ A ++G+ R V
Sbjct: 1231 RQVMRQKFLKHIHLQPKELTINAIDEAFMLKLLKYIDEHITDEDFGVSELASMVGMSRPV 1290
Query: 1349 FYKKVRGVTGYSPYEYLRVMRMKKAAEMLLTEDLTIAEVAYSVGINDPFYFSKCFKNQFG 1408
YKK+R +T S ++++ +R+KKA E+ TI EVAY VG NDP YFS+ FK QFG
Sbjct: 1291 LYKKIRNLTNLSVNDFVKSIRLKKAMELFKQNRFTIYEVAYQVGFNDPKYFSREFKKQFG 1350
Query: 1409 VSPSAYRKKLSEDE 1422
SP A+ E++
Sbjct: 1351 KSPRAFMNGSEEED 1364
Score = 89.7 bits (221), Expect = 2e-21
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 477 HNVYSMCEDNEGQLWLGMR-GIGLRIGADQWYRYNSKDN-NSLSNDNVYLIYRDRKGRMW 534
++V ++ +D +W+G R G+ G NS DN NSLS++ + + D KGR+W
Sbjct: 40 NSVMAITQDKNQFIWMGTRHGLNRYDGYRFKIYNNSSDNLNSLSDNVINTLLSDSKGRLW 99
Query: 535 IGTFGGGLNLAVKTGNGYQF-KHFFQDSYGEKRVRVIQEDRNGMMWVGTNNGIYIFHPDS 593
+GT G K + Y+ K +S+ V I ED +WVGT NG+ +
Sbjct: 100 VGTENGLNIYNDKNDHFYRINKRSSANSFSCDSVECIYEDPQKNIWVGTYNGLNL----- 154
Query: 594 LINSPKNYV---LYNHVNETFPSNEIRCLVNDHEGNMWIGTTGAGFAICYPGNDYQHLTF 650
+I++ K L++ N N I + D + N+W+GT I Y F
Sbjct: 155 VIDTEKQIFKKFLFDKPNYKSALNCIFSIFKDEKQNLWVGTYNGLVRIYQVKGKYHFEIF 214
Query: 651 DCY-SIKDGLPNGVIQSIVEDQDNKMWIATEYGISRFTLATKQIENYYFSSHTLGNVYSE 709
+ K+ + + ++SIV D+ ++W+ T G++ F K + Y S+ ++ +
Sbjct: 215 RHNPNNKNSISSNAVKSIVIDKQKRLWLGTYNGLNLFDYEHKTFKRYQTSATDPNSIINN 274
Query: 710 NTACINAD--GRLLFGTNYGLVVLDAN 734
+ + D G + GT GL +LD N
Sbjct: 275 DIRKLTRDKVGNIWIGTQEGLSILDPN 301