Pairwise Alignments
Query, 1431 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5
Score = 470 bits (1209), Expect = e-136
Identities = 342/1283 (26%), Positives = 610/1283 (47%), Gaps = 90/1283 (7%)
Query: 181 SNDSPGHVWIGTKQGL--WKYHDGKLEAMDTQGESWEHIFSYDQYTCIITGKKEIYRHSL 238
+ D+ VW+GT++G+ + Y D + + + ++ SY + I+ +Y +
Sbjct: 94 NGDAKNRVWVGTQKGISYYDYADSRFHQLIYLDKGRKNEVSYAINSIAISQALAVYVATE 153
Query: 239 SNN--RLEKIASLTELGDTG----VITGSLRL---QHQWVMFTATGSYILDPVTGKLRRF 289
L+K +SL E G +L + Q W+ G D K+R
Sbjct: 154 EKGLFMLKKNSSLAERIPFGKNFDFTVKALYIDDDQTLWLFIKDVGLCKYDKDQNKVRLV 213
Query: 290 SRLNIKNGNVTRDNKGNAWVHNYTGNVWYVNTSTGDIKHFQFLSSEHLGYIDVERYSIIH 349
+ +T+D K W+ G + K Q L++E++ ++
Sbjct: 214 TAALSSVTCITKDTKQTLWLGTERGLFQFDKVKASISKFNQHLNNENI-------MGLLL 266
Query: 350 DSRDIIWITTYGNGLFAYDLNTGDLQHFTFEVSHSSHINSNYLQYIIEDRSGGIWVSSEF 409
D + +WI+T G G+ YD + + ++SN + + ED W+++
Sbjct: 267 DRQQKLWISTDGGGVAVYDTKKQKTSYLSAG-KEKGLLSSNSVAQVYEDHESRKWIATLR 325
Query: 410 SGLSHLEILNKGTLRIYPNGEDASDR-SNTIRMLLRGKNGNVYMANRMGTLYEYDADLKN 468
G++ ++ N+ I + ++ +N + +N N+++ G L ++ L
Sbjct: 326 GGVNIIDTENEQFTTIKHDPLKSNSLINNFVLSFSEDENKNIWIGTDGGGLSVWNRKLNT 385
Query: 469 ILRREK------FTHN-VYSMCEDNEGQLWLGMRGIGL---RIGADQWYRYNSKDNNSLS 518
K T N V S+ D + +W+ G+ ++ YN + +
Sbjct: 386 FANYAKTSDPNSLTSNFVTSILNDADHNVWVASFSGGIDRFNKTTGKFVHYNCYNTSKGV 445
Query: 519 ND-NVYLIYRDRKGRMWIGTFGGGLNLAVKTGNGYQFKHFFQDSYGEKRVRVIQEDRNGM 577
+D N++ +Y+D++ +W+GT GG A+ N K D+ K + + +D G
Sbjct: 446 DDINIWKLYQDKQQNIWVGTTKGG---ALYRYNKSIDKFELFDTK-LKDIHSLFQDSKGR 501
Query: 578 MWVGTNNGIYIFHPDSLINSPKNYVLYNHVNETFPSNEIRCLVNDHEGNMWIGTTGAGFA 637
+W G + P +N NY N IR + D +WIGT G G
Sbjct: 502 LWAGNYTELIEIDP---VNKKHNYTKINFA--------IRAIQEDFNHQIWIGTEGGGLL 550
Query: 638 ICYPGNDYQHLTFDCYSIKDGLPNGVIQSIVEDQDNKMWIATEYGISRFTLATKQIENYY 697
+ P + Y DGLP+ + +I++D +W +T G+SRF + +NYY
Sbjct: 551 LFDP----ETKKIKRYIQSDGLPSNSVLNILQDAQGNLWCSTYNGLSRFDVRHHSFKNYY 606
Query: 698 FSSHTLGNVYSENTACINADGRLLFGTNYGLVVLDANKVENMEKLASTVFTGLHINGAHM 757
+ N ++ N A A+G LFG G + + ++ +++ V T IN
Sbjct: 607 ATDGLQSNQFNYNAALKLANGNFLFGGIGGFNLFSPDSIKKNKRIPKMVLTDFRINN--- 663
Query: 758 LPGMDDSPLNETMSYTGQLNLKHYQNSFVIAFSTFNFLS------GASKYSYRMPPYDSE 811
+P DS N+ +NL + F A + ++ + Y+Y + +D +
Sbjct: 664 IPLDQDSAYNDI----SVINLARIEIPFSDAVISIDYAAIEFSFQDQISYAYYLEGWDRD 719
Query: 812 WSIPSAQNLATYRNLPPGKYQLQVKACNVAGVWGEESTMEIV-IAPPFWQTTWAYLIYLV 870
W+ + + A Y L G+Y+L +K+ + G W + ++ I PP+++T WAY IYL+
Sbjct: 720 WNYVNKLSTAYYSRLNEGEYKLHIKSTDTEGAWSNNEKIVVIRILPPWYRTWWAYTIYLI 779
Query: 871 FIGIVCYFSFHIIR-KFNRLRNRIAV-------EKQLTEYKLEFFTNISHEFRTPLTLIQ 922
IG ++ F R + RL++ + + EK L E KL FFTNISHE RTPLTLI
Sbjct: 780 -IGSSIFYLFQTYRNRQRRLKHEVEITNLKMEREKDLNEKKLNFFTNISHELRTPLTLIV 838
Query: 923 GALNKLINIENPPKEMQRPLKTMDKSTQRMLRLINQLLEFRKMQKNKLALSLEETDVIAF 982
+ +I ++P E + L + ++++R+L L++QLL FRK + L + ++ F
Sbjct: 839 NPIKDIILKKDPGPE-KNDLNIVYRNSRRLLSLVDQLLLFRKTESENDTLKIVRINLYKF 897
Query: 983 LYEIFLSFKDTSESKNIDFSFEPSQPAYKMFIDKGNLDKVTYNLLSNAFKYTPSNGKIIF 1042
EIFL F ++ +ID++FE + ++ DK L+ V +NLLSNA K+TP G +
Sbjct: 898 TNEIFLCFNYLAKQNHIDYTFECEEEELDIYADKDKLEIVFFNLLSNALKFTPKGGFV-- 955
Query: 1043 KIDIQEDKQQLRIQVIDNGIGIPKEKRSELFKRFMQSSFSHS---SVGVGLHLTHELVQV 1099
K ++ +++I+V D+G GIP +LF +F + + S G+GL+L V++
Sbjct: 956 KFSVKPLGMRVQIEVSDSGPGIPAHVGEKLFDKFYKVMSNESLKMGFGIGLYLAKNFVEL 1015
Query: 1100 HKGNISYDENEGGGSVFTVLLPTNSDIYQ-----EKDFLIPNQLLTEEEEQHSKDFLRNE 1154
HKG IS+ N+G G++F + +P Q + + N+L+ +EEE + D
Sbjct: 1016 HKGKISFRSNQGMGTIFLIDIPVGEPNLQHSGVFQNELTYVNELIAQEEEAENND----- 1070
Query: 1155 TSEDTFQPPVDPLNKRKVLIIEDDTDIREFLREEIGVYFEVEVAADGTSGFEKASTYDAD 1214
+E + + +L+I+D+ +I +++R F++ A +GT G ++ Y D
Sbjct: 1071 -TEHVGNLQLLISDLHSILVIDDNPEIIDYIRHIFQENFKIYKAENGTDGLKRCKEYLPD 1129
Query: 1215 LIVCDVLMPGMNGFEVTRKLKNEFTTSHIPIILLTALNIEEKYQEGIESGADAYITKPFN 1274
+++ DV M G+NG E+ + +K++ SHIP+ILLT E +GIE GA +I+KPF+
Sbjct: 1130 IVISDVNMDGLNGIELCKAIKDDSALSHIPVILLTGDPSPEVKLKGIEVGAYDFISKPFD 1189
Query: 1275 VSLLLARIFKLIELRDKLRQKYSNEPGLAHSIICTNDKDQKFSVKLNEVLNEHMTDTDFS 1334
L A+I +I+ R L+ + NE L + +D+ F K ++ E++ + F+
Sbjct: 1190 RELFTAKINSIIKNRTNLQSYFYNEITLKSDAHKVSQEDKGFLQKCIMIIEENLMEDSFN 1249
Query: 1335 VNDFAGIMGLGRTVFYKKVRGVTGYSPYEYLRVMRMKKAAEMLLTEDLTIAEVAYSVGIN 1394
V A +G+ + YK+++ +G S ++R +R++KAAE+L+ +L I E A+ VGIN
Sbjct: 1250 VKILASDLGMSHSNLYKRIKATSGQSVNGFIRFIRLRKAAELLINTNLNINEAAFRVGIN 1309
Query: 1395 DPFYFSKCFKNQFGVSPSAYRKK 1417
D YF + F+ F ++PS + KK
Sbjct: 1310 DSKYFREQFQKLFKLTPSEFIKK 1332
Score = 119 bits (297), Expect = 3e-30
Identities = 158/644 (24%), Positives = 260/644 (40%), Gaps = 50/644 (7%)
Query: 21 SVEIRSNKLTTGDGLANNSIRYMFQDSKGFMWMGTVNGLSYYDGNSFVSIYPDPNLPISL 80
S I L GL+NN + ++ D GFMWMGT +GL+ YDG F SL
Sbjct: 26 STAIPLKYLGVESGLSNNVVNSLYLDHFGFMWMGTYDGLNRYDGYHFKVFRNGWGDEHSL 85
Query: 81 ADPRIRNMEEDSNGFLWIATLSSLYSCYDLKHGRFVDFTGCGEYKQ---SYSKKIIASDQ 137
+ I + D+ +W+ T + S YD RF + ++ SY+ IA Q
Sbjct: 86 VNNHITVLNGDAKNRVWVGTQKGI-SYYDYADSRFHQLIYLDKGRKNEVSYAINSIAISQ 144
Query: 138 SIWLWDNNNGCRRVVYQDGQFSSQAYKKELGNLSSDKVLFVYESNDSPGHVWIGTKQ-GL 196
++ ++ + ++ + SS A + G V +Y +D +W+ K GL
Sbjct: 145 ALAVYVATE--EKGLFMLKKNSSLAERIPFGKNFDFTVKALYIDDDQT--LWLFIKDVGL 200
Query: 197 WKY--HDGKLEAMDTQGESWEHIFSYDQYTCIITGKKEIYRHSLSNNRLEKI-ASLTELG 253
KY K+ + S I + T + ++ +++ + K L
Sbjct: 201 CKYDKDQNKVRLVTAALSSVTCITKDTKQTLWLGTERGLFQFDKVKASISKFNQHLNNEN 260
Query: 254 DTGVITGSLRLQHQWVMFTATGSYILDPVTGKLRRFSRLNIKN-------GNVTRDNKGN 306
G++ R Q W+ G + D K S K V D++
Sbjct: 261 IMGLLLD--RQQKLWISTDGGGVAVYDTKKQKTSYLSAGKEKGLLSSNSVAQVYEDHESR 318
Query: 307 AWVHNYTGNVWYVNTSTGD---IKHFQFLSSEHLGYIDVERYSIIHDSRDIIWITTYGNG 363
W+ G V ++T IKH S+ + + S D IWI T G G
Sbjct: 319 KWIATLRGGVNIIDTENEQFTTIKHDPLKSNSLINNFVL---SFSEDENKNIWIGTDGGG 375
Query: 364 LFAYDLNTGDLQHFTFEVSHSSHINSNYLQYIIEDRSGGIWVSSEFSGLSHLEILNKGTL 423
L ++ ++ + S + + SN++ I+ D +WV+S FSG ++ NK T
Sbjct: 376 LSVWNRKLNTFANYA-KTSDPNSLTSNFVTSILNDADHNVWVAS-FSG--GIDRFNKTTG 431
Query: 424 R-IYPNGEDASDRSNTIRM--LLRGKNGNVYM-ANRMGTLYEYDADLKNILRREKFTHNV 479
+ ++ N + S + I + L + K N+++ + G LY Y+ + + ++
Sbjct: 432 KFVHYNCYNTSKGVDDINIWKLYQDKQQNIWVGTTKGGALYRYNKSIDKFELFDTKLKDI 491
Query: 480 YSMCEDNEGQLWLGMRGIGLRIGADQWYRYNSKDNNSLSNDNVYLIYRDRKGRMWIGTFG 539
+S+ +D++G+LW G + I N K N + N + I D ++WIGT G
Sbjct: 492 HSLFQDSKGRLWAGNYTELIEIDP-----VNKKHNYTKINFAIRAIQEDFNHQIWIGTEG 546
Query: 540 GGLNLAVKTGNGYQFKHFFQ-DSYGEKRVRVIQEDRNGMMWVGTNNGIYIFHPDSLINSP 598
GGL L + K + Q D V I +D G +W T NG+ F D +S
Sbjct: 547 GGLLLF--DPETKKIKRYIQSDGLPSNSVLNILQDAQGNLWCSTYNGLSRF--DVRHHSF 602
Query: 599 KNYVLYNHV-NETFPSNEIRCLVNDHEGNMWIGTTGAGFAICYP 641
KNY + + + F N L N GN G G GF + P
Sbjct: 603 KNYYATDGLQSNQFNYNAALKLAN---GNFLFGGIG-GFNLFSP 642
Score = 35.8 bits (81), Expect = 3e-05
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 604 YNHVNETFPSNEIRCLVNDHEGNMWIGTTGAGFAICYPG-NDYQHLTFDCY----SIKDG 658
Y V +N + L DH G MW+GT Y G N Y F + +
Sbjct: 33 YLGVESGLSNNVVNSLYLDHFGFMWMGT--------YDGLNRYDGYHFKVFRNGWGDEHS 84
Query: 659 LPNGVIQSIVEDQDNKMWIATEYGISRFTLATKQIENYYF 698
L N I + D N++W+ T+ GIS + A + +
Sbjct: 85 LVNNHITVLNGDAKNRVWVGTQKGISYYDYADSRFHQLIY 124