Pairwise Alignments

Query, 1431 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  597 bits (1538), Expect = e-174
 Identities = 422/1441 (29%), Positives = 700/1441 (48%), Gaps = 141/1441 (9%)

Query: 11   LSFYLSSVHASVEIRSNKLTTGDGLANNSIRYMFQDSKGFMWMGTVNGLSYYDGNSFVSI 70
            L F++   +A  +     L   +GL  +S+  + QD++GF+W GT  GL+ YD  SF   
Sbjct: 33   LVFFIIVSNAQNKYAFKHLNVENGLTQSSVLSIAQDARGFIWFGTRFGLNKYDSKSFKVY 92

Query: 71   YPDPNLPISLADPR-IRNMEEDSNGFLWIATLSSLYSCYDLKHGRFVDFTGCGEYKQSYS 129
            Y + N   SL++   + ++    +G L I T + L + Y+     F  +    +   S S
Sbjct: 93   YHEENNEKSLSNASFLSSILALKDGTLLIGTSNGL-NKYNEGDDNFDHYVHNSKDPNSIS 151

Query: 130  K---KIIASDQSIWLWDNNNGCRRVVYQDGQFSSQAYKKELGNLSSDKVLFVYESNDSPG 186
                  I  D+   +W        ++  +G++    +K+ L      + ++   + D  G
Sbjct: 152  NAGISCIFQDKKNRVWIGTTNGLNLLSTNGKYK---FKRFLDKQKQRQQIYAI-TEDHNG 207

Query: 187  HVWIGTKQGL--WKYHDGKLEAMDTQGESWEHIFSYDQYTCIITGKKEIYRHSLSNNRLE 244
             +W+ T  GL   ++ DGK+           H+  +  ++       E    ++ N+   
Sbjct: 208  TLWLSTTYGLVNMRFKDGKI-----------HLRYFKDFS-------EELNKAIDNH--- 246

Query: 245  KIASLTELGDTGVITGSLRLQHQWVMFTATGSYILDPVTGKLRRFSRLN---IKNGNVTR 301
             I ++ E  +  +  G+ +        T      L   T    ++S LN   I + NV +
Sbjct: 247  -ITTMVEDRENNLWIGTKQ--------TGVSKLNLSTETITSYQYSSLNPAGISSNNVRK 297

Query: 302  ---DNKGNAWVHNYTG-NVWYVNTSTGDIKHFQFLSSEHLGYIDVERYSIIHDSRDIIWI 357
               D +G  W+    G N++  N +T +      +  +         Y I  D + IIW+
Sbjct: 298  IMMDQEGKLWIGTLHGINIY--NPATKNFSSLHNIPEDPTSLSQNSVYDIYQDRQGIIWV 355

Query: 358  TTYGNGLFAYDLNTGDLQHFTFEVSHS----SHINSNYLQYIIEDRSGGIWVSSEFSGLS 413
             TY        +N     +  F+V  S    + ++SN +  I+ED+   +W+ +E  GL+
Sbjct: 356  GTYYGA-----INMVYPNYTPFKVYRSTTAPNGLSSNVVSSIMEDQHQNLWIGTEGEGLN 410

Query: 414  HLEILNKGTLRIYPNGEDASDRS-NTIRMLLRGKNGNVYMANRMGTLYEYDADLKNILRR 472
            + +  N    R   N  D    S N ++ ++R K   +++    G L  +  + K  +R 
Sbjct: 411  YYDRKNDTFTRYKNNPNDPKSLSANLVKSVIRDKKNRIWVGTHYGGLNLFQPETKTFVRY 470

Query: 473  EKFTHNVYSMCEDNEGQLWLGMRGIGLRIGADQWYRYNSKDNNSLSNDNVYLIYRDRKGR 532
             K  ++  S+  D                                    +  ++ D  GR
Sbjct: 471  TKHKNDTSSISND-----------------------------------EITALFEDSYGR 495

Query: 533  MWIGTFGGGLNLAVKTGNGYQFKHFFQDSYG--EKRVRVIQEDRNGMMWVGTNNGIYIFH 590
             W+GT GG  +    TG       F ++        V  I ED    +WV TN+G+Y   
Sbjct: 496  FWVGTNGGLNSFNSTTGK------FIRNRVNGLTDAVHYIFEDAKRCLWVATNSGLYQLK 549

Query: 591  PDSLINSPKNYVLYNHVN-ETFPSNEIRCLVNDHEGNMWIGTTGAGFAICYPG-NDYQHL 648
             DS     + ++     + E    NEI CL  D  G + +GT+  G     PG + Y  +
Sbjct: 550  KDS-----QRFISRVAADPEILKYNEITCLTTDKAGYLLMGTSHNGLFRLNPGRHSYSRM 604

Query: 649  TFDCYSIKDGLPNGVIQSIVEDQDNKMWIATEYGISRFTLATKQIENYYFSSHTLGNVYS 708
            T       DGLP+  I  I+ED  N +WI T+ G+ ++    K  + Y       GN ++
Sbjct: 605  T-----TFDGLPSNNIMGILEDDFNNLWITTDKGLCKYNPRQKTFKTYNIKDGLPGNEFN 659

Query: 709  ENTACINADGRLLFGTNYGLVVLDANKVENMEKLASTVFTGLHINGAHMLPGMDDSPLNE 768
              +   ++ G   FG   G+V    N+++  +     +FTGL +    +     D  L +
Sbjct: 660  YKSFLRDSKGAFFFGGLSGMVSFFPNEIKENKNTPPVIFTGLKLFNKPIALHTGDGLLKQ 719

Query: 769  TMSYTGQLNLKHYQNSFVIAFSTFNFL-SGASKYSYRMPPYDSEWS---IPSAQNLATYR 824
             +S    +  +  QN F I F+  NF+ S  ++Y+Y++  ++  W+   IPS    A+Y 
Sbjct: 720  NISTIKSITFESDQNVFSIDFTLLNFIKSDKNRYAYKLGGFEKNWNYVDIPS----ASYT 775

Query: 825  NLPPGKYQLQVKACNVAGVW-GEESTMEIVIAPPFWQTTWAYLIYLVFIGIVCYFSFHII 883
            NL PG Y L VK  N  G+W  E ST++I I PPF++T WAYL Y      +   SF  I
Sbjct: 776  NLSPGNYTLMVKGSNNDGLWTNETSTLDIKILPPFYRTWWAYLFYFCAFAAI---SFVFI 832

Query: 884  RKFNRLRNRIAVEKQLTEYKLEFFTNISHEFRTPLTLIQGALNKLINIENPPKEMQRPLK 943
            R +  ++  +  EK++ E+KLEFFTNISHE RTPLTLI G L+KLI        + R L+
Sbjct: 833  R-YLLIKAVLKKEKEINEHKLEFFTNISHEIRTPLTLIVGPLDKLIENAKDDPALNRDLQ 891

Query: 944  TMDKSTQRMLRLINQLLEFRKMQKNKLALSLEETDVIAFLYEIFLSFKDTSESKNIDFSF 1003
             +  +  R++ L+ +LL+FRK +  K+AL +   DV+ F  EIFL+F++ + SKNID+ F
Sbjct: 892  PIKNNADRLMNLVTELLDFRKAESGKMALHVSPGDVVKFCREIFLAFQNMAISKNIDYQF 951

Query: 1004 EPSQPAYKMFIDKGNLDKVTYNLLSNAFKYTPSNGKIIFKIDIQEDKQQLRIQVIDNGIG 1063
            E +Q A +++ DK  ++KV +NLLSNAFK+TP NGKI  K  I+ +KQ + I++ DNG G
Sbjct: 952  ETTQAAIELYFDKVQMEKVMFNLLSNAFKFTPVNGKISLK--IETEKQLVNIKICDNGKG 1009

Query: 1064 IPKEKRSELFKRFMQSSFSHS-SVGVGLHLTHELVQVHKGNISYD-----ENEGGGSVFT 1117
            IP E ++ LF  F Q++ + +   G+GL  +  +V++H G IS++     +   G + FT
Sbjct: 1010 IPLENQASLFTNFYQANATTTIGTGLGLSFSKSIVELHHGQISFESTPKNDKAFGNTAFT 1069

Query: 1118 VLLPTNSDIYQEKDFLIPNQLLTEEEEQHSKDFLRNET----SEDTFQPPVDPLNKRKVL 1173
            V L T  + +   DF IP+ +  ++   +S       T     +D  Q       K  +L
Sbjct: 1070 VSLKTGKEHFNPSDF-IPDYVYYDDALNYSLSTTTQVTEQIKEDDVLQDDSGKNKKNSIL 1128

Query: 1174 IIEDDTDIREFLREEIGVYFEVEVAADGTSGFEKASTYDADLIVCDVLMPGMNGFEVTRK 1233
            ++ED+ D+R F+++ +   +++    +G +G E A     DLI+ DV+MP M+G E+ RK
Sbjct: 1129 LVEDNEDVRTFIKQALSPSYQIYERENGATGLECALDLIPDLIISDVMMPVMDGLELCRK 1188

Query: 1234 LKNEFTTSHIPIILLTALNIEEKYQEGIESGADAYITKPFNVSLLLARIFKLIELRDKLR 1293
            LK +  TSHIP++LLTA +       G E+GADAYI KPFN+ +L   I  L+  R+ ++
Sbjct: 1189 LKTDERTSHIPVVLLTARSAYVHQVNGFENGADAYIMKPFNLKILELNIQNLLNARETVK 1248

Query: 1294 QKYSNEPGLAHSIICTNDKDQKFSVKLNEVLNEHMTDTDFSVNDFAGIMGLGRTVFYKKV 1353
            +K++    L    +  N  +Q F  K+ +++ + + D DF V   +  +G+ + V YKK+
Sbjct: 1249 KKFAQVITLEPRNMVINTTEQHFLNKIIQLIEDRIADPDFDVPTLSAEVGMSQPVLYKKI 1308

Query: 1354 RGVTGYSPYEYLRVMRMKKAAEMLLTEDLTIAEVAYSVGINDPFYFSKCFKNQFGVSPSA 1413
            R +T  S  ++++ +R+K+AA++L      IAE+AYSVG ND  YFS  FK  FG +PS 
Sbjct: 1309 RALTDLSVNDFIKSLRIKRAAQLLKQGTGNIAEIAYSVGFNDRKYFSSEFKKHFGKTPSE 1368

Query: 1414 Y 1414
            +
Sbjct: 1369 F 1369