Pairwise Alignments

Query, 432 a.a., Exopolygalacturonase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 557 a.a., glycoside hydrolase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  127 bits (318), Expect = 1e-33
 Identities = 88/311 (28%), Positives = 142/311 (45%), Gaps = 50/311 (16%)

Query: 48  SITDYGVANDSTVVQTKKIQEVIDLAARNGGGVIVIPKGTFLSGSLFFKNNTHLHLEEDA 107
           SI  +G   D   + T+ I + I   ++ GGGV++IP G +L+G +  K+N +LHL+ DA
Sbjct: 48  SIVRFGAKGDGITLNTQSINKTIASVSQKGGGVVLIPSGLWLTGPIELKSNVNLHLKRDA 107

Query: 108 VLKGSDDISHFPVKMTRMEGQTLKYFMALVNADGLDGFTISGKGTLNGNGLRY------- 160
           +L+ +DD + + +     EGQ      + ++   L+   I+G G ++GNG  +       
Sbjct: 108 ILQFTDDFNQYKLVQGNWEGQPAWRNQSPISGVNLENIAITGTGIIDGNGGAWRMVKKDK 167

Query: 161 -----WKSF-------------W------LRRSINPDCTNMEE-------------MRPR 183
                WK+              W      L+ S   +   +E              +RP 
Sbjct: 168 LTETQWKTLVASGGIVKADGKMWYPSEKTLKGSNTKNAGVIEAGKTAADYEDIKDFLRPN 227

Query: 184 IIYLSNCKNTQIEGIRIMNSPFWSTHFYKCSFLKLLNLRITSPASPVKAPSTDAVDLDVC 243
           ++ L+ CK   +EG+   NSP W+ H   C  L L NL++ +P     A + D VD++ C
Sbjct: 228 LLVLTGCKKILLEGVTFQNSPAWNLHPLLCEDLTLRNLQVKNPWF---AQNGDGVDVESC 284

Query: 244 NNVLIKNCYMSVNDDAVALKGGKGPWADKDANNGENYDIIIEDCTYGFCHSAFTCGSE-S 302
            NVLI+     V DD + +K G+     K     EN  +II +      H  F  GSE S
Sbjct: 285 KNVLIEGSTFDVGDDGICIKSGRDEAGRKRGVPTEN--VIIRNNVVYHAHGGFVIGSEMS 342

Query: 303 ILSRNVIVRRC 313
             ++N+ V  C
Sbjct: 343 GGAKNIWVYDC 353