Pairwise Alignments

Query, 432 a.a., Exopolygalacturonase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 525 a.a., polygalacturonase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  148 bits (373), Expect = 5e-40
 Identities = 122/444 (27%), Positives = 200/444 (45%), Gaps = 73/444 (16%)

Query: 47  YSITDYGVANDSTVVQTKKIQEVIDLAARNGGGVIVIPKGTFLSGSLFFKNNTHLHLEED 106
           Y++  YG  NDS+ + T  I+  I+ A++ GGG +  P G +L+G++  K+N  + ++  
Sbjct: 26  YNVIKYGAKNDSSKLATTAIKNAIEAASKAGGGTVYFPAGKYLTGAIHLKSNITILIDAG 85

Query: 107 AVLKGSDDI-SHFPVKMTRMEGQTLKYFMALVNADGLDGFTISGKGTLNGNGLRYW---- 161
           A L  SD+   + P+  +R EG  +  F  L  A  ++  +I G+G ++G+G ++W    
Sbjct: 86  AELHFSDNFDDYLPMVKSRYEGVDVTSFSPLFYAYKVENISIIGRGMIDGHGKKWWDFVE 145

Query: 162 -------KSFW------LRRSI----NPDCTNMEEMRPRIIYLSNCKNTQIEGIRIMNSP 204
                  +S W      L + I    +P       +RP  I    CKN  I+GI I NSP
Sbjct: 146 GYKEGQARSKWQTIFDGLNKDILLPDDPKQMKRGFLRPPFIQPMFCKNVLIDGITIRNSP 205

Query: 205 FWSTHFYKCSFLKLLNLRITSPASPVKAPSTDAVDLDVCNNVLIKNCYMSVNDDAVALKG 264
           FW+ +   C  +K+  + I +P S    P+TD ++ + C NV I +C++SV DD + +K 
Sbjct: 206 FWTVNPEFCENVKVHAVTINNPHS----PNTDGINPESCKNVHISDCHISVGDDCITIKS 261

Query: 265 GKGPWADKDANNGENYDIIIEDCTYGFCHSAFTCGSE-SILSRNVIVRRCKVDRARALLT 323
           GK     K A   ENY  +I +CT    H     GSE S   R + +  C  D     + 
Sbjct: 262 GKDAPGRKMAVPAENY--VITNCTMLSGHGGVVIGSEMSGDVRKIAISNCIFDGTERGIR 319

Query: 324 LK------------------MRSDTPQ------KYEYILVEDITGNVQNCLNI------A 353
           +K                  M++ T Q      +Y    VE ++       NI       
Sbjct: 320 IKTARGRGGVVEDIRVSNIIMKNITDQAIVLDMQYAKTNVEAVSARTPIFRNIHFSNITG 379

Query: 354 PWTQFYDLKDRKDTPLSYSNNITMRNIDIDCNVFFNVKKSDQYKLSDFCFENLTVRAKKG 413
              Q   L   ++ P+   +NIT  +I++D    F+++ S     S+  F N+TV  + G
Sbjct: 380 QVNQAAYLNGLEEMPI---DNITFNDINMDAKTGFSIQNS-----SNIEFHNVTVNTELG 431

Query: 414 ------KVDQSVIDSFTMNNVKIN 431
                 KV+  ++D    N    N
Sbjct: 432 ASLKALKVNNLIVDGLKSNKPHAN 455