Pairwise Alignments

Query, 665 a.a., putative helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 747 a.a., porphyrin biosynthesis protein from Caulobacter crescentus NA1000

 Score = 53.1 bits (126), Expect = 4e-11
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 527 YAHEYLLMGNECITQAHDARAAIANYDKALSLDPNYIDAWIRKGITLFNSKEYFDAENCF 586
           Y   +L +GN  I  A  A A   ++ +A+ L P+Y +A    G  L  S    +AE CF
Sbjct: 224 YPQVHLTLGNALIDLARAAEAE-ESFRQAIRLKPDYSEAHCNLGCALKLSGRLTEAETCF 282

Query: 587 NTAVSLHPANFKAVYNRGKLRLKIDNTEGAIADLDKATSLKPEHAGAH 634
             A+ L+PA+ +A  N G +   +     A A    A  LKPE+  AH
Sbjct: 283 RRAIQLNPADAQAHNNLGDVFKDLGRFADAEAFYRAAIGLKPEYLEAH 330



 Score = 40.8 bits (94), Expect = 2e-07
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 5/124 (4%)

Query: 539 ITQAHDARAAIANYDKALSLDPNYIDAWIRKGITLFNSKEYFDAENCFNTAVSLHPANFK 598
           + +A +A AA  +   AL+L P+Y    +  G  L +     +AE  F  A+ L P   +
Sbjct: 204 LKRAEEAEAACRS---ALALAPDYPQVHLTLGNALIDLARAAEAEESFRQAIRLKPDYSE 260

Query: 599 AVYNRG-KLRLKIDNTEGAIADLDKATSLKPEHAGAHELFGDALLRVGKEVEAAIQWRIA 657
           A  N G  L+L    TE A     +A  L P  A AH   GD    +G+  +A   +R A
Sbjct: 261 AHCNLGCALKLSGRLTE-AETCFRRAIQLNPADAQAHNNLGDVFKDLGRFADAEAFYRAA 319

Query: 658 EELR 661
             L+
Sbjct: 320 IGLK 323



 Score = 38.9 bits (89), Expect = 9e-07
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)

Query: 547 AAIANYDKALSLD-PNYIDAWIRKGITLFNSKEYFDAENCFNTAVSLHPANFKAVYNRGK 605
           AA  +   AL+L  PN+   W   G     +    ++      A+SL+P + +   N   
Sbjct: 140 AAAESQAHALTLSFPNHELGWKVLGAVFSVTGRSEESLASMRQALSLNPQDAETFKNLAI 199

Query: 606 LRLKIDNTEGAIADLDKATSLKPEHAGAHELFGDALLRVGKEVEAAIQWRIAEELR 661
           L LK+   E A A    A +L P++   H   G+AL+ + +  EA   +R A  L+
Sbjct: 200 LLLKLKRAEEAEAACRSALALAPDYPQVHLTLGNALIDLARAAEAEESFRQAIRLK 255



 Score = 38.9 bits (89), Expect = 9e-07
 Identities = 31/113 (27%), Positives = 52/113 (46%)

Query: 548 AIANYDKALSLDPNYIDAWIRKGITLFNSKEYFDAENCFNTAVSLHPANFKAVYNRGKLR 607
           ++A+  +ALSL+P   + +    I L   K   +AE    +A++L P   +     G   
Sbjct: 176 SLASMRQALSLNPQDAETFKNLAILLLKLKRAEEAEAACRSALALAPDYPQVHLTLGNAL 235

Query: 608 LKIDNTEGAIADLDKATSLKPEHAGAHELFGDALLRVGKEVEAAIQWRIAEEL 660
           + +     A     +A  LKP+++ AH   G AL   G+  EA   +R A +L
Sbjct: 236 IDLARAAEAEESFRQAIRLKPDYSEAHCNLGCALKLSGRLTEAETCFRRAIQL 288