Pairwise Alignments

Query, 1450 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1365 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  501 bits (1290), Expect = e-145
 Identities = 394/1493 (26%), Positives = 697/1493 (46%), Gaps = 208/1493 (13%)

Query: 11   LFNYCILVAQPTYQIKHYSVNDGMSQGIVQTIIQDKKGFLWFGTWNGLNKFDGYTFKNYK 70
            LF    L AQ      H  + +G+SQ  V  I QDK  F+W GT +GLN++DGY FK Y 
Sbjct: 14   LFICTTLCAQKHLVFNHLRMENGLSQNSVMAITQDKNQFIWMGTRHGLNRYDGYRFKIYN 73

Query: 71   TSYKDGYILNTNRISQIAETKYGDIWCQAYDGRVYMFDNQTEKFIDILGSVAETMITNNY 130
             S  +   L+ N I+ +     G +W                     +G+     I N+ 
Sbjct: 74   NSSDNLNSLSDNVINTLLSDSKGRLW---------------------VGTENGLNIYNDK 112

Query: 131  ADHIYTLSKGISWITFQNECAAIRIDDQLCKQGKGITLYSSFKQNLKGDKIYTVFEDSEG 190
             DH Y ++K  S  +F   C                            D +  ++ED + 
Sbjct: 113  NDHFYRINKRSSANSF--SC----------------------------DSVECIYEDPQK 142

Query: 191  DEWILTNKGISII--GKKQVDSDFPFQ--YIKEADGIIYLVSQSDK----LASYNFKTRQ 242
            + W+ T  G++++   +KQ+   F F     K A   I+ + + +K    + +YN   R 
Sbjct: 143  NIWVGTYNGLNLVIDTEKQIFKKFLFDKPNYKSALNCIFSIFKDEKQNLWVGTYNGLVRI 202

Query: 243  FKFIEIPYHVSMI----NEVKKFDSNT-----------LLLATDNGLIIYKIKEKEFQLI 287
            ++ ++  YH  +     N      SN            L L T NGL ++  + K F+  
Sbjct: 203  YQ-VKGKYHFEIFRHNPNNKNSISSNAVKSIVIDKQKRLWLGTYNGLNLFDYEHKTFKRY 261

Query: 288  DIRTSTQPSNV----VQSVYQDHYKELWIFPQTTGVIRYNPSTKEMQHLFTPADEVIRYE 343
               ++T P+++    ++ + +D    +WI  Q  G+   +P+T++  +     ++     
Sbjct: 262  Q-TSATDPNSIINNDIRKLTRDKVGNIWIGTQ-EGLSILDPNTRKFSNYRYDPEQPDGLS 319

Query: 344  RKNKNVIFEDRQHTLWVLPPEGNLSYYDRENKELK-----PMLKDSNNPKSVFSPLVRFY 398
            + + + IF+D   ++++       +YY   N          + ++S   + + S +V   
Sbjct: 320  QNSIHSIFQDLNGSVYL------GTYYKGANVVYPSATPFTVFRNSKTRQGLSSDIVSAM 373

Query: 399  TLDNQGNCWL-TSTRGIYKLSFFPHTYNLVHID----NGFETRAF--LC-DNEKRLWVSS 450
              D   N W+ T   G+  ++   HT+    ++    NG  +     LC D   +L V +
Sbjct: 374  VEDQNHNLWIGTEGGGLNYVNRSNHTFTYYKLEPNSNNGLNSNLIKTLCLDKTGQLLVGT 433

Query: 451  KAQMIRVYQPDG-QLEGYLTPQGKISKDKQSFTSVYCFLEDHEGNIWIGTKENGIYLLKK 509
                + ++   G   +  +  + K  K+    + V    ED +G +W+G+++ G+  LKK
Sbjct: 434  HRGGLYLFNAAGHNFKKIINVKNK--KNNPGGSEVIAITEDSDGTVWVGSRD-GLSTLKK 490

Query: 510  KSPDSYSVQQFTHQPNMPYSLSGNSVYSIFQDSHKRIWIGCYGGGINLLTYNKDGKTEFI 569
             +   Y+    T +  +  +L    +  IF+D  K +WIG   G   L  Y+   K    
Sbjct: 491  TN-GLYAAT--TVKSPLEQNLRNKYIQVIFEDKAKNLWIGTMAG---LYAYHPATKRITA 544

Query: 570  HSDNELKNYPTGYASKVRHISEAPGGVLLIGTT-NGLLTFSNQFERPEEIKFYRNCCESG 628
            +  N+ K      +  +  I +   G + +GT+  GL  F N+  +      ++N  E  
Sbjct: 545  YYKNKTKPGSLN-SDHINCIVQIQNGNICVGTSFGGLSIFDNKSRK------FKNYNE-- 595

Query: 629  ISTSLSGNDVMHTYTDKQKRTYIASFTGGISQIVSKNLLSNKIEFKTYTTDDGLASD--L 686
                L  ++V+    D++   +I S   G+S++++K        F  YT  DGLA +   
Sbjct: 596  -KDGLPNSNVLGIIEDEENNLWI-STDKGLSKLITKT-----GRFINYTKSDGLAGNDFN 648

Query: 687  VQAMQEDQQGNLWILSENAISKFDAQRKTFENYGLNSLHQEFSFSEAAPVINARNQIVFG 746
            +++  +D +G L+    + ++ F   +                                 
Sbjct: 649  IRSFLKDSRGELFFGGYDGLTAFYPSQ--------------------------------- 675

Query: 747  TDKGFIEISSKEMQKSSYVPPIVFTGLKVQGQSSVIAIDD---------LEELRLTPSQR 797
                 I+I+S     +  V PI FT LK+  +   +   D         ++++       
Sbjct: 676  -----IDINS-----NRNVAPITFTELKLFDKPVAVNAPDGLLNEDIKSIKQITFKHDNN 725

Query: 798  NVTFQFAALDYVDSKEIRYAYRLKGLEEEWHDGDKNRSASYINLPNGKYKLQIKSTNSDG 857
            N +  FA L+Y+  ++  Y Y LKG  ++W   D   S +Y +LP G Y   +   N+DG
Sbjct: 726  NFSLDFALLNYIKPEKNSYRYILKGHSKDWVKTDV-PSVTYSDLPAGNYTFIVTGNNNDG 784

Query: 858  VWMDNIRTLSINVLPTFWETGWAWLLYVILFVLFTGSIVYVLFYIYRLRHQVDIEQQLSN 917
               +   +L I VLP FW T WA+L+Y+  F      IV  LF    L+   DI++    
Sbjct: 785  NPGNKPASLKITVLPPFWATWWAYLIYLACFSGLLFLIVRYLFVRALLKRTEDIQK---- 840

Query: 918  IKLRFFTDISHELRTPLTLISSPVNEVLENEDLSATAREHLTVVQKNAERMLRLMNQILD 977
            +KL FFT ++HE+RTPLTLI  P+  + +           +  ++ NA R++RL+ +++D
Sbjct: 841  MKLNFFTYVAHEIRTPLTLILGPLENLSKQYQTDTELNRQIIPIKNNANRLMRLITELMD 900

Query: 978  FRKIQNQKMKVLVEKTDLIPLLEKVMINFRLIAEEKKINFRLASELKSIYAWIDRDKFEK 1037
            FRK +   + + V + +++  + ++ I+F  +A+   I +      ++I  + D+ + EK
Sbjct: 901  FRKAETGHLTLHVTEDNIVDFINEIFISFSHLAQTNDIQYEFVRGQENISLFFDKRQLEK 960

Query: 1038 IFFNLISNAFKYTPAEKAITIEVTKQTDKVTISVVDEGIGIEPTKLRTLFQRFETLAQQN 1097
            + FNL+SNAFK+      I++ +    ++V IS+ D G+GI    L+ LF  +  + +Q+
Sbjct: 961  VLFNLLSNAFKFCDKGGKISVTLVDMDNEVAISIADNGLGIPAESLKNLFSDYFQVDEQH 1020

Query: 1098 MLQPSSGIGLSLVKEMVDMHHGTIKVTSEP-EAGSR----FIVTLPLQKEVFEQDSQVEF 1152
              Q  SGIGL+L K +V+ H G I V S P E G R    F V L   K  F+       
Sbjct: 1021 SNQIGSGIGLALSKAIVEEHKGHIAVESTPAENGERGFTNFTVRLKKGKSHFK-----TA 1075

Query: 1153 ILNDSQSPTTHPDSSLQTEKRAEAEDKEDMENNTAPDTLTILVVEDNEELKAFLKNILSE 1212
            I + ++   THP  ++ T++  +  +    E  T   T TILVVEDN E++  + +++  
Sbjct: 1076 IFDGAKDYPTHP--NIYTQQPEKELNILKPEKETDLSTETILVVEDNSEIRQLIASLIGG 1133

Query: 1213 NYTVITASNGKEGLQHAVDNIPDLIISDVMMPVMDGLEMIRQIKENNNICHIPIIVLSAK 1272
            +Y V  + NG  G + AV+ +PDLII D+MMP+MDG+E+ R++KE+    HIP+I+L+A+
Sbjct: 1134 HYLVAESENGLMGWETAVETLPDLIICDIMMPIMDGIELCRRLKEDERTSHIPVIILTAR 1193

Query: 1273 ASLDDRIAGLEQGIDDYITKPFSATYLKTRIASLLRQRKSLQEIYMAKLTEGKEIAVAEA 1332
            +S   +++GLE G D YITKPFS   L   + +LL  R+ +++ ++  +           
Sbjct: 1194 SSHIHQVSGLETGADAYITKPFSPELLLLNVRNLLMSRQVMRQKFLKHI----------H 1243

Query: 1333 LTPSQPQITPYDEQFMQKVMEFIEEQMDNAELTIDEFAEHLMLSRTIFYRKLKSIIGLTP 1392
            L P +  I   DE FM K++++I+E + + +  + E A  + +SR + Y+K++++  L+ 
Sbjct: 1244 LQPKELTINAIDEAFMLKLLKYIDEHITDEDFGVSELASMVGMSRPVLYKKIRNLTNLSV 1303

Query: 1393 VDFIREVRIKRAAQLIDSGEYNFSQVAYMTGFNDPKYFSKCFKKVVGITPSEY 1445
             DF++ +R+K+A +L     +   +VAY  GFNDPKYFS+ FKK  G +P  +
Sbjct: 1304 NDFVKSIRLKKAMELFKQNRFTIYEVAYQVGFNDPKYFSREFKKQFGKSPRAF 1356