Pairwise Alignments

Query, 1450 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1349 a.a., hybrid sensor histidine kinase/response regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  548 bits (1412), Expect = e-159
 Identities = 396/1374 (28%), Positives = 661/1374 (48%), Gaps = 162/1374 (11%)

Query: 163  GKGITLYSSFKQNLKG----DKIYTVFEDSEGDEWILTNKGISIIGKKQVDSDFPFQYIK 218
            GK + +Y +   N       D IY + ED + + WI T  G++             +YI 
Sbjct: 48   GKSVKIYRTDPDNPASISTEDYIYALEEDRQKNLWIGTQNGLN-------------RYIP 94

Query: 219  EADGIIYLVSQSDKLASYNFKTRQFKFIEIPYHVSMINEVKKFDSNTLLLATDNGLIIYK 278
            E D    +        S + K      I +  +     +V  F +N  L   +NG     
Sbjct: 95   EKDAFERIAFDPKNANSISDK------IILSIYADRSGKVW-FGTNQGLSMLENG----- 142

Query: 279  IKEKEFQLIDIRTSTQPSNVVQSVYQDHYKELWIFPQTTGVIR--YNPSTKEMQHLFTPA 336
               ++F+ I  +      N V ++++D    +W+   TTG+ R  +      +Q  +  A
Sbjct: 143  -SSRKFKKI-YQKDGLAGNSVYTIFEDSKGNIWV-GTTTGLSRLSFKEGKYHIQSFYHRA 199

Query: 337  DEVIRYERKNKNVIFEDRQHTLWVLPPEGNLSYYDRENKELKPMLKDSNNPKSVFSPLVR 396
             +       +   I ED +  +W+      L+ +  ++   K     +  P ++ + +VR
Sbjct: 200  GDPGSISGNSIRTIAEDGKGRIWIGSESEGLNLFLPQSHSFKRFRYSALQPNALSNDIVR 259

Query: 397  FYTLDNQGNCWLTSTRGIYKLSFFPHTYNLVHIDNGFETRAFLCDNEKR---------LW 447
                D +GN W+ +  G+  L     T       +  + R  L DN  +         +W
Sbjct: 260  KIMPDGKGNLWIATMNGLNILD--TQTLGFTSYKHDADNRKSLSDNSIKEIFQDDQGSIW 317

Query: 448  VSSKAQMIRVYQPDG---QLEGYLTPQGKISKDKQSFTSVYCFLEDHEGNIWIGTKENGI 504
            + +    + V   +     +  Y   +  IS D  S  +      D++ N+WIGT+  G+
Sbjct: 318  IGTMFGGVNVAHRNTIPFTVFKYSKYRNSISSDISSVIAA-----DNDQNLWIGTEGQGL 372

Query: 505  YLLKKKSPDSYSVQQFTHQPNMPYSLSGNSVYSIFQDSHKRIWIGCYGGGINLLTYNKDG 564
                 K+      +++ + P  P SLS N++ +IF D   RIWIG Y GG+ L       
Sbjct: 373  NFYNVKTG---LFKKYINDPRDPGSLSNNTIKAIFNDRKGRIWIGLYQGGLEL------- 422

Query: 565  KTEFIHSDNELKNYPTGY----ASKVRHISEAPGGVLLIGTTN-GLLTFSNQFERPEEIK 619
               FI S  + K+YP G        +  ISE   G LL+GT++ GL  F      PE+  
Sbjct: 423  ---FIPSTGKFKHYPPGRNGLSQGYLSSISEDDQGRLLLGTSSKGLNIFD-----PEKES 474

Query: 620  FYRNCCESGISTSLSGNDVMHTYTDKQKRTYIASFTG------GISQI--------VSKN 665
            F     + G    LS + +   Y D +K  ++ +  G      G +             +
Sbjct: 475  FQLIDDQPGHGLKLSSSYIRFAYQDTKKNLWVGTPRGLNFLPPGANHFSVFSRDDKTKGS 534

Query: 666  LLSNKI----------------------------EFKTYTTDDGLASDLVQAMQEDQQGN 697
            L S++I                             F TYT   GLASD +  + +D  GN
Sbjct: 535  LKSSQITCLWEDRLGHIWVGTMRGGLSLYHPDSKSFSTYTRAQGLASDNIIDVLDDNDGN 594

Query: 698  LWILSENAISKFDAQRKTFENYGLNSLHQEFSFSEAAPVINARNQIVFGTDKGFIEISSK 757
            LWI ++  +SKFD +R  F+NY          F+  +   +   ++ FG+  G +  + +
Sbjct: 595  LWISTDRGLSKFDYKRGVFKNYNTGDGLPTNEFNVNSAYRDIHGKLYFGSYDGLVVFTPR 654

Query: 758  EMQKSSYVPPIVFTGLKVQGQSSVIAIDD---------LEELRLTPSQRNVTFQFAALDY 808
            E+ +++ +P  VF+GLK+  +   I  D+          + +  T  Q   + +F +L+Y
Sbjct: 655  EITENTLIPRTVFSGLKLFNKPVGINEDNGLLKQDISFTKGITFTAEQNIFSLEFVSLNY 714

Query: 809  VDSKEIRYAYRLKGLEEEWHDGDKNRSASYINLPNGKYKLQIKSTNSDGVWMDNIRTLSI 868
            V  +  RYAY+L+G E++W+      SASY NLP+G YKL +K +N+DG+W      + I
Sbjct: 715  VQPQRNRYAYKLEGFEKDWNYVTIP-SASYTNLPSGNYKLLVKGSNNDGLWSKAPVVMEI 773

Query: 869  NVLPTFWETGWAWLLYVIL------FVL-FTGSIVYVLFYIYRLRHQVDIEQQLSNIKLR 921
             VLP  W+T WA+ LY I       FVL FT     +   +Y      + + +L  +KL 
Sbjct: 774  RVLPPLWQTWWAYTLYFIAGGLLLYFVLRFTRRQQKLKTELYYEHLNSERQSELYQMKLD 833

Query: 922  FFTDISHELRTPLTLISSPVNEVLENEDLSATAREHLTVVQKNAERMLRLMNQILDFRKI 981
            FFT ISHE+RTPLTLI +P+ ++++    +      L  +++N +R++RL++++LDFRKI
Sbjct: 834  FFTRISHEIRTPLTLIFAPLEKLIKITAENGAVNLQLQNIKRNTDRLVRLISELLDFRKI 893

Query: 982  QNQKMKVLVEKTDLIPLLEKVMINFRLIAEEKKINFRLASELKSIYAWIDRDKFEKIFFN 1041
            ++  + + V + DL+    ++  ++  +AE K I++R   E +S+  + D  + EK+F+N
Sbjct: 894  ESGNLSLKVSENDLVSFCRQIYESYLGLAEIKNIDYRFECEAESMLVYYDPAQMEKVFYN 953

Query: 1042 LISNAFKYTPAEKAITIEVTKQTDKVTISVVDEGIGIEPTKLRTLFQRFETLAQQNMLQP 1101
            ++SNAFK+TP    IT  + +      I++ D GIGI       +F  F  +        
Sbjct: 954  ILSNAFKFTPDNGKITFSLKQSDGLAKIAITDTGIGIPADLQDKIFTNFFQVKNGAAATE 1013

Query: 1102 SSGIGLSLVKEMVDMHHGTIKVTSEPEAGSR-----FIVTLPLQKEVFEQDSQVEF--IL 1154
              GIGL+L K ++D+H G + V SEP    R       V+L L K  F  D Q+    I+
Sbjct: 1014 GWGIGLALAKNILDLHKGEVNVYSEPANNKRQGITILHVSLLLGKNHF-SDEQIASNPIV 1072

Query: 1155 NDSQSPTTHPDSSLQTEKRAEAEDKEDMENNTAPDTLTILVVEDNEELKAFLKNILSENY 1214
             D        D  L   +    EDK+           T+LVVEDN+EL+ F+   L   Y
Sbjct: 1073 TDKPVAVGSLDHELAKIQLVAPEDKK---------RHTVLVVEDNDELRDFIVQSLKHTY 1123

Query: 1215 TVITASNGKEGLQHAVDNIPDLIISDVMMPVMDGLEMIRQIKENNNICHIPIIVLSAKAS 1274
             ++   NG  G + A +++PD+++SDV MP ++G E+ +++K+     HIP+I+L+A AS
Sbjct: 1124 HILEGKNGLVGWEVATEHVPDIVVSDVTMPELNGFELCQRLKQEETTNHIPVIMLTAMAS 1183

Query: 1275 LDDRIAGLEQGIDDYITKPFSATYLKTRIASLLRQRKSLQEIYMAKLTEGKEIAVAEALT 1334
               +I GLE G D YITKPFS   L+  I +LL+ R+ L++ Y+ ++           L 
Sbjct: 1184 HVHQIDGLEAGADVYITKPFSIQVLELSIRNLLQGREELRQKYIKQI----------MLN 1233

Query: 1335 PSQPQITPYDEQFMQKVMEFIEEQMDNAELTIDEFAEHLMLSRTIFYRKLKSIIGLTPVD 1394
            P + +    +E+F+ ++M+ IE+ M++ E  +    + + +S+T+ Y+K+K++ GL+  D
Sbjct: 1234 PRKLETASPEEKFLNRLMQLIEDGMEDPEFNVGGLVDQIGMSQTVLYKKIKALTGLSISD 1293

Query: 1395 FIREVRIKRAAQLIDSGEYNFSQVAYMTGFNDPKYFSKCFKKVVGITPSEYKEK 1448
            FI+  R+KRAAQL++  + N ++VAY  GFND KYFSK F+K  G+ PSEY++K
Sbjct: 1294 FIKSQRLKRAAQLLNDHKMNIAEVAYSVGFNDRKYFSKEFRKQFGVAPSEYQQK 1347