Pairwise Alignments

Query, 1450 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1347 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  481 bits (1239), Expect = e-139
 Identities = 377/1481 (25%), Positives = 661/1481 (44%), Gaps = 188/1481 (12%)

Query: 7    LLISLFNYCILVAQPTYQIKHYSVNDGMSQGIVQTIIQDKKGFLWFGTWNGLNKFDGYTF 66
            L+I +  +  L AQ  +   H  +  G+S   V  I +D  GF+WFGT +GLN+++GY+F
Sbjct: 11   LIILIIRFTDLHAQDLFS--HLGIEKGLSNNSVNAIYKDHFGFMWFGTDDGLNQYNGYSF 68

Query: 67   KNYKTSYKDGYILNTNRISQIAETKYGDIWCQAYDGRVYMFDNQTEKFIDILGSVAETMI 126
            + Y+ +  D   L  N++  +AE   G +W     G V +  +   KF+  +        
Sbjct: 69   RIYRNNPNDSSSLVNNQVIGMAEDGSGTLWIATKRG-VSVLHSFPSKFVKPIFKAYNDKK 127

Query: 127  TNNYADHIYTLSKGISWITFQNECAAIRIDDQLCKQGKGITLYSSFKQNLKGDKIYTVFE 186
                   IY +  G     F            +     G+ +Y +  +            
Sbjct: 128  ARPIDQEIYAIKGGNHGDVF------------IGASDLGLLVYDNHSRE----------- 164

Query: 187  DSEGDEWILTNKGISIIGKKQVDSDFPFQYIKEADGIIYLVSQSDKLASYNFKTRQFKFI 246
                       + +S    ++V + +  + I+      +L++ +  LA Y+++++Q   +
Sbjct: 165  ----------TRQVSFQPGEKVLTPYSIRAIRPVQDRAWLINPAKGLAYYDYRSKQISLV 214

Query: 247  EIPYHVSMINEVKKFDSNTLLLATDNGLIIYKIKEKEFQLIDIRTSTQPSNVVQSVYQDH 306
                 +   N ++   S  L + TD+GL  Y I  K F+   +      +  + S+  D 
Sbjct: 215  SSNGDIRNANSIEADQSGNLWIGTDHGLYRYNILAKSFKWYSVAPGQLLAQRILSLAFDR 274

Query: 307  YKELWIFPQTTGVIRYNPSTKEMQHLFTPADEVIRYERKNKNVIFEDRQHTLWVLPPEGN 366
               L I     G I    + KE     T  +          +VI +D +H +WV    G 
Sbjct: 275  RNRLLIATDGGG-INIMDTEKESFSYQTAGESPSSLNSNAISVILKDEEHRIWVGTLRGG 333

Query: 367  LSYYDRENKELKPMLKDSNNPKSVFSPLVRFYTLDNQGNCWLTSTRGIYKLSFFPHTYNL 426
            ++  DR+  E K + ++  + +S+ S  +  +  D  G  W+ +  G   L      +  
Sbjct: 334  INVLDRKRNEFKHIYRNPLSQQSLVSDFILSFCEDRDGKIWIGTDGGGISLWDRLKGFKT 393

Query: 427  VHIDNG-------FETRAFLCDNEKRLWVSSKAQMIRVYQPDGQLEGYLTPQGKISKDKQ 479
               +NG           + +  N   +W+++    I  Y        Y        KD+ 
Sbjct: 394  YRHENGNPQSLSSNNVTSIVRSNNDVIWIATFGGGINRYNRGSGTFKYYPCANSWGKDE- 452

Query: 480  SFTSVYCFLEDHEGNIWIGTKENGIYLLKKKSPDSYSVQQFTHQPNMPYSLSGNSVYSIF 539
               +V+    D +G IW GT   G+ LL   +  S   + F ++          ++ +I 
Sbjct: 453  ---NVWKLFIDKKGGIWAGTCV-GVGLLYHYNVASDRFEPFNNE-------HLKNIIAIN 501

Query: 540  QDSHKRIWIGCYGGGINLLTYNKDGKTEFIHSDNELKNYPTGYASKVRHISEAPGGVLLI 599
            +D    +W G +     L  Y   GK         +  Y   Y   +R I     G L +
Sbjct: 502  EDKLGNLWFGSFN---KLYKYTAGGK---------VITYDIRY--PIRSIFFNKSGDLFV 547

Query: 600  GTT-NGLLTFSNQ---FERPEEIKFYRNCCESGISTSLSGNDVMHTYTDKQKRTYIASFT 655
            GT   GLL ++++   F+   E            S  LS N V++   D     ++++F 
Sbjct: 548  GTQYAGLLKYNSKNGSFQAFTE------------SDGLSNNTVLNIEEDDHANLWLSTFN 595

Query: 656  GGISQIVSKNLLSNKIEFKTYTTDDGLASDLVQAMQEDQQGNLWILSENAISKFDAQRKT 715
            G                                                 ++KF+ +  T
Sbjct: 596  G-------------------------------------------------LTKFNYRNNT 606

Query: 716  FENYGLNSLHQEFSFSEAAPVINARNQIVFGTDKGFIEISSKEMQKSSYVPPIVFTGLKV 775
            F  + + +  Q   F+  A       Q++FG  KGF   +   +  +S  PP+  T L+ 
Sbjct: 607  FNKFYIENGLQCNEFNYNASAHLRSGQLLFGGIKGFNIFNPDSIMNNSAFPPLRLTDLRA 666

Query: 776  QGQSSV------IAIDDLEELRLTPSQRNVTFQFAALDYVDSKEIRYAYRLKGLEEEWHD 829
              +  +       ++ D +E+++   +  ++F ++AL+Y     I Y+Y L+GLE  W++
Sbjct: 667  SNEPLISDAAYSASLYDTKEIKIPYDRALLSFDYSALEYSFPSRISYSYYLEGLENNWNN 726

Query: 830  GDKNRSASYINLPNGKYKLQIKSTNSDGVWMDNIRTLSINVLPTFWETGWAWLLYVILFV 889
                RS +Y  L  G Y L I+STN +G+W     TL I +LP ++ + WA+L Y+ +  
Sbjct: 727  VRTARSGNYSRLHEGTYVLHIRSTNGEGIWNPRQLTLKIIILPPWYRSWWAYLTYLAI-- 784

Query: 890  LFTGSIVYVLFYI-------YRLRHQVDI-------EQQLSNIKLRFFTDISHELRTPLT 935
                 I Y+L+          RL +Q+++       E++L+  KL FFT ISHE R+PLT
Sbjct: 785  -----ISYLLYRFNRYKSNQVRLNYQIEMATANAEKERELNERKLSFFTHISHEFRSPLT 839

Query: 936  LISSPVNEVLENEDLSATAREHLTVVQKNAERMLRLMNQILDFRKIQNQKMKVLVEKTDL 995
            LI +PV E+L +   +    + L++V  NA+R+L L++Q+L FRK  +++  + + K ++
Sbjct: 840  LIINPVKELLYSSGKNIDVSD-LSIVYLNAKRLLSLVDQLLLFRKADHEEDDLKISKLNI 898

Query: 996  IPLLEKVMINFRLIAEEKKINFRLASELKSIYAWIDRDKFEKIFFNLISNAFKYTPAEKA 1055
            + + + V + F   A  K I+    S  + I  + DR+K E + FN++SNAFK+T    +
Sbjct: 899  VLVCKDVFLCFTSQARLKNIDITFESAEEYIEIFADREKIEIVLFNILSNAFKFTEKNGS 958

Query: 1056 ITIEVTKQTDKVTISVVDEGIGIEPTKLRTLFQRF-ETLAQQNMLQPSSGIGLSLVKEMV 1114
            I ++V     ++ I + D G GI P     LF +F +     N+     GIGL L K+ +
Sbjct: 959  IHVKVEDYDGRIAILIQDNGRGIHPEIGDKLFDKFYQAPKSYNVSVKGFGIGLYLAKKFI 1018

Query: 1115 DMHHGTIKVTSEPEAGSRFIVTLPLQKE----VFEQDSQVEFILND---SQSPTTHPDSS 1167
              H G +   SE   G+ F + L    E    +       EFI+ D   ++     P ++
Sbjct: 1019 TSHKGELTYHSEIGEGTVFRIELLKGLEHLAGITVHHEDTEFIMPDLDLAEEEAEEPVTA 1078

Query: 1168 LQTEKRAEAEDKEDMENNTAPDTLTILVVEDNEELKAFLKNILSENYTVITASNGKEGLQ 1227
            ++     E +       N   +   IL+V+DNE  + ++K I  E++ +  A +G++GL 
Sbjct: 1079 MEQPDSGELD-------NLVSEQPAILIVDDNELFRQYIKRIFKESFIIYEAVDGEDGLI 1131

Query: 1228 HAVDNIPDLIISDVMMPVMDGLEMIRQIKENNNICHIPIIVLSAKASLDDRIAGLEQGID 1287
             A   +PD+IISDV MPV DG+++  +IK +  I HIP+I+L++  S + ++ GLE G +
Sbjct: 1132 KAKKQLPDIIISDVTMPVKDGIQLCTEIKADPAISHIPVILLTSSTSSEIKLKGLECGAE 1191

Query: 1288 DYITKPFSATYLKTRIASLLRQRKSLQEIYMAKLTEGKEIAVAEALTPSQPQITPYDEQF 1347
            DYITKPF A  L  RI ++L+ R SLQ  +   +T          L     +I+P  ++F
Sbjct: 1192 DYITKPFEAELLTARINNILKSRNSLQRYFYNAVT----------LQADNQKISPTFKEF 1241

Query: 1348 MQKVMEFIEEQMDNAELTIDEFAEHLMLSRTIFYRKLKSIIGLTPVDFIREVRIKRAAQL 1407
            + K +   E  +DN +      A  + +S +  Y+K+KSI G +  +FIR +R+++AA+L
Sbjct: 1242 LSKCISITERHLDNPDFNTKVLANEVGMSHSALYKKVKSISGKSINEFIRFIRLRKAAEL 1301

Query: 1408 IDSGEYNFSQVAYMTGFNDPKYFSKCFKKVVGITPSEYKEK 1448
            +   +   ++ A+  GFN+ KYF + F K+  +TPSEY +K
Sbjct: 1302 LIQTDSRVNEAAFRAGFNNQKYFREQFTKLFEMTPSEYIKK 1342