Pairwise Alignments
Query, 1450 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482
Subject, 1373 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5
Score = 573 bits (1477), Expect = e-167
Identities = 398/1475 (26%), Positives = 690/1475 (46%), Gaps = 195/1475 (13%)
Query: 19 AQPTYQIKHYSVNDGMSQGIVQTIIQDKKGFLWFGTWNGLNKFDGYTFKNYKTSYKDGYI 78
AQ Y KH +V +G++Q V +I QD +GF+WFGT GLNK+D K++K
Sbjct: 42 AQNKYAFKHLNVENGLTQSSVLSIAQDARGFIWFGTRFGLNKYDS---KSFK-------- 90
Query: 79 LNTNRISQIAETKYGDIWCQAYDGRVYMFDNQTEKFIDILGSVAETMITNNYADHIYTLS 138
VY + EK ++ ++ I L
Sbjct: 91 -------------------------VYYHEENNEK----------SLSNASFLSSILALK 115
Query: 139 KGISWITFQNECAAIRIDDQLCKQGKGITLYSSFKQNLKGDK------IYTVFEDSEGDE 192
G I N L K +G + + N K I +F+D +
Sbjct: 116 DGTLLIGTSNG---------LNKYNEGDDNFDHYVHNSKDPNSISNAGISCIFQDKKNRV 166
Query: 193 WILTNKGISIIGKKQVDSDFPFQYIKEADGIIYLVSQSDKLASYNFKTRQFKFIEIPYHV 252
WI T G++++ Y FK +F++
Sbjct: 167 WIGTTNGLNLLSTN---------------------------GKYKFK----RFLDKQKQR 195
Query: 253 SMINEVKKFDSNTLLLATDNGLIIYKIKEKEFQLIDIRTSTQP-----SNVVQSVYQDHY 307
I + + + TL L+T GL+ + K+ + L + ++ N + ++ +D
Sbjct: 196 QQIYAITEDHNGTLWLSTTYGLVNMRFKDGKIHLRYFKDFSEELNKAIDNHITTMVEDRE 255
Query: 308 KELWIFPQTTGVIRYNPSTKEMQHLFTPADEVIRYERKNKNVIFEDRQHTLWVLPPEGNL 367
LWI + TGV + N ST+ + + N I D++ LW+ G +
Sbjct: 256 NNLWIGTKQTGVSKLNLSTETITSYQYSSLNPAGISSNNVRKIMMDQEGKLWIGTLHG-I 314
Query: 368 SYYDRENKELKPMLKDSNNPKSVFSPLVRFYTLDNQGNCWLTSTRGIYKLSFFPHT---- 423
+ Y+ K + +P S+ V D QG W+ + G + + +T
Sbjct: 315 NIYNPATKNFSSLHNIPEDPTSLSQNSVYDIYQDRQGIIWVGTYYGAINMVYPNYTPFKV 374
Query: 424 YNLVHIDNGFETR---AFLCDNEKRLWVSSKAQMIRVYQPDGQLEGYLTPQGKISKDKQS 480
Y NG + + + D + LW+ ++ + + Y T D +S
Sbjct: 375 YRSTTAPNGLSSNVVSSIMEDQHQNLWIGTEGEGLNYYDRKNDT---FTRYKNNPNDPKS 431
Query: 481 FTS--VYCFLEDHEGNIWIGTKENGIYLLKKKSPDSYSVQQFTHQPNMPYSLSGNSVYSI 538
++ V + D + IW+GT G+ L + P++ + ++T N S+S + + ++
Sbjct: 432 LSANLVKSVIRDKKNRIWVGTHYGGLNLFQ---PETKTFVRYTKHKNDTSSISNDEITAL 488
Query: 539 FQDSHKRIWIGCYGGGINLLTYNKDGKTEFIHSDNELKNYPTGYASKVRHISEAPGGVLL 598
F+DS+ R W+G GG L ++N + ++N G V +I E L
Sbjct: 489 FEDSYGRFWVGTNGG---LNSFNST-------TGKFIRNRVNGLTDAVHYIFEDAKRCLW 538
Query: 599 IGTTNGLLTFSNQFER--------PEEIKFYRNCCESGISTSLSGNDVMHTYTDKQKRTY 650
+ T +GL +R PE +K+ N++ TDK
Sbjct: 539 VATNSGLYQLKKDSQRFISRVAADPEILKY---------------NEITCLTTDKAGYLL 583
Query: 651 IASFTGGISQIVSKNLLSNKIEFKTYTTDDGLASDLVQAMQEDQQGNLWILSENAISKFD 710
+ + G+ + L + + TT DGL S+ + + ED NLWI ++ + K++
Sbjct: 584 MGTSHNGLFR-----LNPGRHSYSRMTTFDGLPSNNIMGILEDDFNNLWITTDKGLCKYN 638
Query: 711 AQRKTFENYGLNSLHQEFSFSEAAPVINARNQIVFGTDKGFIEISSKEMQKSSYVPPIVF 770
++KTF+ Y + F+ + + +++ FG G + E++++ PP++F
Sbjct: 639 PRQKTFKTYNIKDGLPGNEFNYKSFLRDSKGAFFFGGLSGMVSFFPNEIKENKNTPPVIF 698
Query: 771 TGLKVQGQSSVIAIDD---------LEELRLTPSQRNVTFQFAALDYVDSKEIRYAYRLK 821
TGLK+ + + D ++ + Q + F L+++ S + RYAY+L
Sbjct: 699 TGLKLFNKPIALHTGDGLLKQNISTIKSITFESDQNVFSIDFTLLNFIKSDKNRYAYKLG 758
Query: 822 GLEEEWHDGDKNRSASYINLPNGKYKLQIKSTNSDGVWMDNIRTLSINVLPTFWETGWAW 881
G E+ W+ D SASY NL G Y L +K +N+DG+W + TL I +LP F+ T WA+
Sbjct: 759 GFEKNWNYVDIP-SASYTNLSPGNYTLMVKGSNNDGLWTNETSTLDIKILPPFYRTWWAY 817
Query: 882 LLYVILFVLFTGSIVYVLFYIYRLRHQVDIEQQLSNIKLRFFTDISHELRTPLTLISSPV 941
L Y F S V++ + + ++ + E++++ KL FFT+ISHE+RTPLTLI P+
Sbjct: 818 LFYFCAFAAI--SFVFIRYLL--IKAVLKKEKEINEHKLEFFTNISHEIRTPLTLIVGPL 873
Query: 942 NEVLENEDLSATAREHLTVVQKNAERMLRLMNQILDFRKIQNQKMKVLVEKTDLIPLLEK 1001
++++EN L ++ NA+R++ L+ ++LDFRK ++ KM + V D++ +
Sbjct: 874 DKLIENAKDDPALNRDLQPIKNNADRLMNLVTELLDFRKAESGKMALHVSPGDVVKFCRE 933
Query: 1002 VMINFRLIAEEKKINFRLASELKSIYAWIDRDKFEKIFFNLISNAFKYTPAEKAITIEVT 1061
+ + F+ +A K I+++ + +I + D+ + EK+ FNL+SNAFK+TP I++++
Sbjct: 934 IFLAFQNMAISKNIDYQFETTQAAIELYFDKVQMEKVMFNLLSNAFKFTPVNGKISLKIE 993
Query: 1062 KQTDKVTISVVDEGIGIEPTKLRTLFQRFETLAQQNMLQPSSGIGLSLVKEMVDMHHGTI 1121
+ V I + D G GI +LF F + +G+GLS K +V++HHG I
Sbjct: 994 TEKQLVNIKICDNGKGIPLENQASLFTNFYQANATTTI--GTGLGLSFSKSIVELHHGQI 1051
Query: 1122 KVTSEPE-----AGSRFIVTLPLQKEVFEQDSQV------EFILNDSQSPTTHPDSSLQT 1170
S P+ + F V+L KE F + + LN S S TT ++
Sbjct: 1052 SFESTPKNDKAFGNTAFTVSLKTGKEHFNPSDFIPDYVYYDDALNYSLSTTTQVTEQIKE 1111
Query: 1171 EKRAEAEDKEDMENNTAPDTLTILVVEDNEELKAFLKNILSENYTVITASNGKEGLQHAV 1230
+ + + ++ +N +IL+VEDNE+++ F+K LS +Y + NG GL+ A+
Sbjct: 1112 DDVLQDDSGKNKKN-------SILLVEDNEDVRTFIKQALSPSYQIYERENGATGLECAL 1164
Query: 1231 DNIPDLIISDVMMPVMDGLEMIRQIKENNNICHIPIIVLSAKASLDDRIAGLEQGIDDYI 1290
D IPDLIISDVMMPVMDGLE+ R++K + HIP+++L+A+++ ++ G E G D YI
Sbjct: 1165 DLIPDLIISDVMMPVMDGLELCRKLKTDERTSHIPVVLLTARSAYVHQVNGFENGADAYI 1224
Query: 1291 TKPFSATYLKTRIASLLRQRKSLQEIYMAKLTEGKEIAVAEALTPSQPQITPYDEQFMQK 1350
KPF+ L+ I +LL R++++ K+ A L P I ++ F+ K
Sbjct: 1225 MKPFNLKILELNIQNLLNARETVK----------KKFAQVITLEPRNMVINTTEQHFLNK 1274
Query: 1351 VMEFIEEQMDNAELTIDEFAEHLMLSRTIFYRKLKSIIGLTPVDFIREVRIKRAAQLIDS 1410
+++ IE+++ + + + + + +S+ + Y+K++++ L+ DFI+ +RIKRAAQL+
Sbjct: 1275 IIQLIEDRIADPDFDVPTLSAEVGMSQPVLYKKIRALTDLSVNDFIKSLRIKRAAQLLKQ 1334
Query: 1411 GEYNFSQVAYMTGFNDPKYFSKCFKKVVGITPSEY 1445
G N +++AY GFND KYFS FKK G TPSE+
Sbjct: 1335 GTGNIAEIAYSVGFNDRKYFSSEFKKHFGKTPSEF 1369
Score = 34.7 bits (78), Expect = 7e-05
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 650 YIASFTGGISQIVSKNLLSNKIEFKTYTTDDGLASDLVQAMQEDQQGNLWILSENAISKF 709
Y+ +FT IVS NK FK ++GL V ++ +D +G +W + ++K+
Sbjct: 27 YLQTFTLVFFIIVSN--AQNKYAFKHLNVENGLTQSSVLSIAQDARGFIWFGTRFGLNKY 84
Query: 710 DAQRKTFENYGLNSLHQEFSFSEAA 734
D+ K+F+ Y + + E S S A+
Sbjct: 85 DS--KSFKVY-YHEENNEKSLSNAS 106