Pairwise Alignments

Query, 399 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 379 a.a., glycoside hydrolase family 88 protein from Pantoea sp. MT58

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 82/343 (23%), Positives = 138/343 (40%), Gaps = 49/343 (14%)

Query: 42  MIRCPESWQLDFQPRLKWDYCHGLELGAMLDVYDTYGDKKIRDYAIAYADTMVHEDGSIT 101
           ++R  +   +D +    W++ HG+ L  ML  Y   GD          A T+   D   T
Sbjct: 46  LLRLDDGRVIDTKGWAGWEWTHGIGLYGMLHYYQQTGD----------AQTLAIIDRWFT 95

Query: 102 AYKLTDYSLDRINSGKILFRI---YEQTKDEKYKKALD-----LLYSQFAGQPRNEDGGF 153
                      +N+      +   YE+T++  +   L+     ++Y      PR E GG 
Sbjct: 96  QRLAEGTPTKNVNTVCPFLTLAYRYEETRNPAWVPVLERWAEWVMYEM----PRTEQGGL 151

Query: 154 WH---KKIYPHQMWLDGLYMGAPFYAEYAFRNNRPQDYADVINQFITCARHTYDPKNGLY 210
            H         Q+W D L M     A+      R +   +   QF+   ++  D + GL+
Sbjct: 152 QHIVYNNENTQQLWDDTLMMSVMALAKIGQLLKRDEWVEEASYQFLLHTQYLMDRETGLW 211

Query: 211 RHACDVSRTERWADPVTGQSKHCWGRALGWYAMALVDVLDFI--PKHEAGRDSLLAILDN 268
            H  +      +A+         W R   W  + + D L+ +  P+H A R  L  +L++
Sbjct: 212 FHGWNFDGRHNFANAR-------WARGNSWVTIVIPDFLEMMNWPEHHATRRFLQQVLES 264

Query: 269 VAVQVKKLQDPETGGWYQVMDRSGDKGNYLESSCSAMFIYSLFKAVRMGYIDPSYLDVAK 328
               +K  Q   +G W+ ++D   D  +Y E+S +A F Y + KAVR  Y+  +Y +VA+
Sbjct: 265 QVNALKACQH-SSGLWHTLLD---DPHSYPEASATAGFAYGILKAVRKRYLPAAYREVAE 320

Query: 329 AGYEGFLKNFIEVDKDGVVTITKACAVAGLGGKVYRSGDYDYY 371
               G + N   +D+DG +         G         D DYY
Sbjct: 321 KALRGVIAN---IDEDGELMQVSFGTAMG--------SDLDYY 352