Pairwise Alignments

Query, 495 a.a., D-galacturonate transporter ExuT (from data) from Bacteroides thetaiotaomicron VPI-5482

Subject, 430 a.a., hexuronate transporter ExuT from Burkholderia phytofirmans PsJN

 Score =  158 bits (399), Expect = 4e-43
 Identities = 112/419 (26%), Positives = 184/419 (43%), Gaps = 46/419 (10%)

Query: 5   RWTICAMLFFATTVNYLDRQVLSLTWDEFIKPEFHWDESHYGTITSVFSIVYAICMLFAG 64
           RW + +++     +NYL R  LS+     +K + H     Y  +   + + YA     AG
Sbjct: 7   RWWMVSLVAAGLIINYLARNTLSVAAPALMK-DLHITTEQYAHVVVAWQLCYAFMQPVAG 65

Query: 65  RFVDWMGTKKGFLWAIGVWSAGACLHAVCGIVTEAQVGLHSAAELAGATGDVVVTIATVS 124
             +D +GTK GF      WS  AC  A          G  S A   G             
Sbjct: 66  FLLDTVGTKIGFAAFALAWSL-ACAAAAWS------TGWRSLAFFRG------------- 105

Query: 125 MYCFLAARCILALGEAGNFPAAIKVTAEYFPKKDRAYATSIFNAGASIGALIAPLTIPIL 184
                    +L + EA   PA +K T+E+FP K+R+ A   FN G+SIGAL+AP  +   
Sbjct: 106 ---------LLGIAEAAGIPAGVKATSEWFPAKERSVAIGWFNIGSSIGALLAPPLVVWA 156

Query: 185 AKAFGWEMAFIVIGGLGFIWMGFWVFMYDAPSKSKHVNKAELEYIEQDQNEAGAGPKTEE 244
                W++AF+++G  G +W   W+ +Y  P   K +  AE +YI      +G   K  +
Sbjct: 157 LLHGEWQLAFVIVGVAGIVWSVLWMALYKHPRNQKLLGDAERDYI-----LSGQEAKHSD 211

Query: 245 KDEKKMRFWQCFSYKQTWAFVFGKFTTDGVWWFFLFWTPSYLNSQFGIKTSDPLGMGLIF 304
               K  +      +  WA    +  ++  W  F  W P Y+ ++  +   + + +    
Sbjct: 212 AGAAKRNWIAMLGSRDFWAIGIPRILSEPAWQTFNAWIPLYMMTERHMNLKE-VALYAWM 270

Query: 305 TLYAITMLSIYGGKLPTIFINKTGMNPYAARMKAMLIFAFFPL----VVLLAQPLGTFSP 360
              A  +  + GG L  +F     ++ + +R    ++ A F +    V L+A      SP
Sbjct: 271 PFLAADIGCVLGGYLSPLFHKYAKVSLFTSRKMVFVVGALFMIGPACVGLVA------SP 324

Query: 361 WFPVILIGIGGAAHQSWSANIFSTVGDMFPRTAIASITGIGGMAGGIGSMILQKVAGNL 419
           +  V L+ +GG AHQ+ S  +++   DMF +  +A+ TG+GGMAG +G+     + G L
Sbjct: 325 YVAVALLCVGGFAHQTLSGALYAITSDMFGKNEVATATGMGGMAGYLGAAAFTALFGVL 383



 Score = 28.1 bits (61), Expect = 6e-04
 Identities = 19/83 (22%), Positives = 31/83 (37%)

Query: 124 SMYCFLAARCILALGEAGNFPAAIKVTAEYFPKKDRAYATSIFNAGASIGALIAPLTIPI 183
           S Y  +A  C+          A   +T++ F K + A AT +      +GA        +
Sbjct: 323 SPYVAVALLCVGGFAHQTLSGALYAITSDMFGKNEVATATGMGGMAGYLGAAAFTALFGV 382

Query: 184 LAKAFGWEMAFIVIGGLGFIWMG 206
           L    G+   F+V+     I  G
Sbjct: 383 LVTQIGYSPLFVVLAVFDIIAAG 405