Pairwise Alignments

Query, 1124 a.a., DNA helicase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 637 a.a., DNA helicase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  100 bits (248), Expect = 5e-25
 Identities = 149/630 (23%), Positives = 256/630 (40%), Gaps = 148/630 (23%)

Query: 573  ELQRTVADDAQHTLPNFRQGDAIVLYERN-ADTDNVTNKMVFKGNIDYLNENEICIRLRA 631
            EL+RT   D  H    FR G A+VL+  + A  D V      +G I + + + + I  R 
Sbjct: 62   ELERTTHQDFSH---QFRFGSAVVLFSNHDAKEDRV------EGIITHQSGSRMKISFRV 112

Query: 632  TQ----QNSSVLPSDSLYAIEHDAMDTTFRSMYQGLYAFMSATKERRDLLLSQRE-PQFD 686
             +         L  D L+  ++++ D    ++ Q  +   + ++ +   +L++ E P F 
Sbjct: 113  DELPDWTRDGKLGVDLLF--DNNSYDEMQSALKQATHLAENESENKLIRILTKGEKPSFQ 170

Query: 687  VALDKQIAEAADDFTRIALKAKAAKDYFLLV-GPPGTGKTSCALKKMVETFYKEEGAQIL 745
                  I    +D  ++A+    A D+  +V GPPGTGKT+  L   +++  K    +IL
Sbjct: 171  GEEKFIIPNTLNDSQQLAVNKIIAADHLAVVHGPPGTGKTT-TLVHAIKSLAKHSDQKIL 229

Query: 746  LLSYTNRAVDEICKALSSIRPEVDFIRVGSEL---------SCDENYRDH---------- 786
            +++ +N AVD + + L++   +V  IRVG+           + D    DH          
Sbjct: 230  VVAPSNTAVDLLTEKLAAEGLKV--IRVGNPARVSERLLAATLDHQMADHPEMKTIKALK 287

Query: 787  --------------------------LIENELATCMRRTEVCER------INRCRILVGT 814
                                       + +E     +  E  E+        + +I+  T
Sbjct: 288  KQASEYKNMAHKYKRSFGKAERDQRKALFDEAHKIGKEVEKTEQYIMDNLFTKAQIITAT 347

Query: 815  VASISGKPELFRLKHFDVAIVDEATQILEPQL-LGILCAKGENGKEGVGKFILIGDHKQL 873
            +  +       R   ++  ++DEA Q LEP   + IL A+         K IL GDH QL
Sbjct: 348  L--VGANHYTVRNLKYNTIVIDEAGQALEPACWIPILKAQ---------KVILAGDHFQL 396

Query: 874  PAVVLQNTEQSEVYDEALSAVGLKNLKDSLFERLYRTARQHTDAHRTYDMLCRQGRMHPE 933
               +  N                  L ++L E+   T + H ++     +L  Q RM+  
Sbjct: 397  SPTIKSNE------------AARNGLSNTLLEK---TVKLHPES---VVLLKEQYRMNAA 438

Query: 934  VALFANQAFYEGRL-----------LPVGLPHQLEDSGNINRLSFYPSRPEPMGSSAKTN 982
            +  ++ Q FY   L            P   P Q  D+          S  E +  ++ TN
Sbjct: 439  IMGYSAQVFYHNELKAHHSVAGHLLFPGDQPIQFIDTAGC-------SFDEKLDGTSTTN 491

Query: 983  HSEAK--------IAARLAATVYKEHSEAFDASRTLGIITPYRSQIALIK---KEIEVLG 1031
              EA         + A LAA      +   D   ++ I++PY+ Q+ ++    +E E+L 
Sbjct: 492  PDEAAFLIKHLTHLVANLAA------NPTTDGFPSIAIVSPYKQQVQILNALAQENEILN 545

Query: 1032 ISELNQILIDTVERFQGSERDVIIYSFCVNYPYQLKFLSNLTEEDGILID-RKLNVALTR 1090
                N I ++T++ FQG ERDV+  S            SN     G L D R++NVA+TR
Sbjct: 546  PYR-NHIAVNTIDSFQGQERDVVYISLT---------RSNSDGSIGFLSDTRRMNVAMTR 595

Query: 1091 ARKQMLLTGVPTLLERNPLYKSLLKLIESL 1120
            ARK++++ G  + L ++  Y   ++  E L
Sbjct: 596  ARKKLVIIGDSSTLSKSDFYADFIQYAEQL 625