Pairwise Alignments

Query, 483 a.a., Trk system K+ uptake protein trkH (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 480 a.a., TrkH family potassium uptake protein (RefSeq) from Shewanella loihica PV-4

 Score =  309 bits (792), Expect = 1e-88
 Identities = 164/482 (34%), Positives = 276/482 (57%), Gaps = 4/482 (0%)

Query: 1   MINSRMIYRIMGFLLLIETAMLMCCGGVSLFYKEDDLNSFLLSSAITAFVGVIMLAIGRG 60
           M+N R +  I+G  L   TA +      +L Y E+ + +F+++S IT       +  G+ 
Sbjct: 1   MLNFRPLLFILGVFLSTLTAFMFFPLLFALLYGEETVGAFMIASLITGTCASACMHQGQS 60

Query: 61  AEKSLNRRDGYVIVSVAWIAFSFFGMLPYYIGGYIPSVTDAFFETMSGFSSTGATIMNNI 120
               LN RD +++ S+ W   S F  +P+ +   I + TDAFFETMSG ++TG+T+++ +
Sbjct: 61  ENIRLNIRDMFLLTSLTWFIVSLFAAMPFTLYHGI-NYTDAFFETMSGITTTGSTVLSGL 119

Query: 121 ESMPHGILFWRAMTQWIGGLGIVFFTIAVLPIFGMGGIQVFAAEASGPTHDKVHPRIGVT 180
           ++M H IL WR++ QW+GG+G +   +A+LP   +GG+++F  E+S  + DK  PR    
Sbjct: 120 DTMDHSILIWRSLLQWLGGIGFIVMAVAILPFLNVGGMRLFRTESSDWS-DKAVPRTQDM 178

Query: 181 AKWIWGIYAGMTGTLIILLVFGGMGLFDSICHAFTTTSTGGFSTKQTSIEYYHSPYIDYV 240
           AK ++ +Y  +T    +     GM  F +I HA TT STGG+ST  +S+  +  P   +V
Sbjct: 179 AKHLFYVYIILTVCCGVAYHLAGMTWFQAINHAMTTLSTGGYSTSDSSMAAFSKP-AHWV 237

Query: 241 ISVFMFLSGVNFTLLLLMFNGKIKKFIHDAELKFYFMSVAFFTVFIAVWLYQTSSMGAEE 300
            ++FM   G+   + +   + +  +  +DA++K Y + +AF +  +A WL+    M A +
Sbjct: 238 GTIFMAAGGLPLLMFVHSLSQRSLRIWNDAQVKGYLIFLAFVSCSLAFWLWHGHEMTAAD 297

Query: 301 AFRKSLFQVISLQTSTGFATADYMLWPSILWGCLLIVMIMGACAGSTTGGIKCIRMVILF 360
           A R + F V+S+ T+TG+   DY  W ++     L +M  G+C+GST+GGIK  R  I  
Sbjct: 298 ALRLASFNVVSVVTTTGYGLTDYTSWGAVANVAFLFLMFAGSCSGSTSGGIKIFRFQIAI 357

Query: 361 KVAKNEFKHILHPNAVLPVRVNKQVISPSIQSTVLAFTFLYAIIAIISILVMMGFGVGFL 420
            + + + K   HPN +   R N + I+  I  +++ F  L+ ++ ++  ++++  G+   
Sbjct: 358 AIMREQLKQQFHPNGIFKERYNGRPITEDIVRSLVTFILLFMLVIVLLSVILVSTGLDPT 417

Query: 421 ESIGTVISSIGNMGPGLG-TCGPAFSWSELPDAAKWLLSFLMLLGRLELFTVLLLFSSDF 479
            S    ++++ N+GPGLG   GPA ++S LPD AKW L+  MLLGRLE+ TV +LF  +F
Sbjct: 418 TSFTGAVTAVTNVGPGLGPVIGPAGNFSSLPDIAKWSLAIGMLLGRLEILTVAVLFHPNF 477

Query: 480 WK 481
           WK
Sbjct: 478 WK 479