Pairwise Alignments

Query, 483 a.a., Trk system K+ uptake protein trkH (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 485 a.a., TrkH family potassium uptake protein (RefSeq) from Shewanella loihica PV-4

 Score =  325 bits (834), Expect = 2e-93
 Identities = 169/483 (34%), Positives = 275/483 (56%), Gaps = 8/483 (1%)

Query: 5   RMIYRIMGFLLLIETAMLMCCGGVSLFYKEDDLNSFLLSSAITAFVGVIMLAIGRGAEKS 64
           R I RI G L+ + +  L+    V++ YK+    +FL +  ++  +G ++    R  +K 
Sbjct: 4   RTIIRITGLLMGLFSLSLLPPALVAVIYKDGGGTAFLQAFFLSLLLGFVLWYPNRRHKKD 63

Query: 65  LNRRDGYVIVSVAWIAFSFFGMLPYYIGGYIP-SVTDAFFETMSGFSSTGATIMNNIESM 123
           L  R+G+++V + W      G +P+        S+TD+FFE+ S  ++TGAT++  ++S+
Sbjct: 64  LRTREGFMLVVLFWGVLGSIGAVPFIFSSQPDLSLTDSFFESFSALTTTGATVLVGLDSL 123

Query: 124 PHGILFWRAMTQWIGGLGIVFFTIAVLPIFGMGGIQVFAAEASGPTHD-KVHPRIGVTAK 182
           P  ILF+R + QW+GG+GI+   +A+LP+ G+GG+Q++ AE  GP  D K+ PRI  TAK
Sbjct: 124 PKAILFYRHLLQWLGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDSKMTPRIAETAK 183

Query: 183 WIWGIYAGMTGTLIILLVFGGMGLFDSICHAFTTTSTGGFSTKQTSIEYYHSPYIDYVIS 242
            +W IY  +T          GM +FD+ICH+F+T + GGFST   S+ Y+ S  I+ V  
Sbjct: 184 ALWYIYLALTIACAFAYWVAGMDVFDAICHSFSTIAIGGFSTHDASMGYFDSTAINMVCV 243

Query: 243 VFMFLSGVNFTLLLLMFNGK---IKKFIHDAELKFYFMSVAFFTVFIAVWLYQTSSM-GA 298
           VF+ ++ +NF+L    F  +   +K ++ DAE K   +     T+     LY T     A
Sbjct: 244 VFLLIAALNFSLHFAAFTRRGINLKVYLRDAEFKALIVIQLALTLICFATLYHTGIYDSA 303

Query: 299 EEAFRKSLFQVISLQTSTGFATADYMLWPSILWGCLLIVMIMGACAGSTTGGIKCIRMVI 358
           EE F  +LFQ +S+ T+ GF T  + +WP  L   L+    +G C GST GGIK +RM++
Sbjct: 304 EETFDFALFQAVSISTTAGFGTESFHMWPLFLPMLLIFSSFIGGCGGSTAGGIKVMRMIL 363

Query: 359 LFKVAKNEFKHILHPNAVLPVRVNKQVISPSIQSTVLAFTFLYAIIAIISILVMMGFGVG 418
           L      E K ++HP  +  +R+N + +   I   V  F   YA++ ++ +L++M  G+ 
Sbjct: 364 LLLQGSRELKRLVHPRGMFSIRINGKALPDRIIDAVWGFFSAYALVFVVCMLILMALGMD 423

Query: 419 FLESIGTVISSIGNMGPGLGTCGPAFSWSELPDAAKWLLSFLMLLGRLELFTVLLLFSSD 478
            + +     + + N+GPGLG    A +++ + D  KW+L   ML GRLE+FT+L+LF+  
Sbjct: 424 NITAFSATAACLNNLGPGLGEV--ASNYASIGDGEKWVLVVAMLFGRLEVFTLLVLFTPT 481

Query: 479 FWK 481
           FWK
Sbjct: 482 FWK 484