Pairwise Alignments

Query, 904 a.a., TonB-dependent receptor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 922 a.a., TonB-dependent receptor from Phocaeicola vulgatus CL09T03C04

 Score =  107 bits (267), Expect = 3e-27
 Identities = 200/944 (21%), Positives = 389/944 (41%), Gaps = 115/944 (12%)

Query: 27  NIKIKGAVKDKL---SKEPLIGATIRLVGTPAGAVTDMDGNFELNSTGVLEGLYDIEIKY 83
           NI  +GA++ ++    K+ L GA+I +     G ++D++G + L +  +  G Y +++ Y
Sbjct: 28  NIVRQGAIRGRVIDNGKQILPGASIFVENLKTGVISDVNGFYTLPN--LKPGTYTVKVTY 85

Query: 84  VGYKTEVRRKVRVENGKLAILNLELETDAHELSDVVVVAKKNRENENMLLLEQQKAVIAV 143
           VGY + +  KV V  GK    ++ +  +  EL +V V  K   + +   +  Q+  +   
Sbjct: 86  VGY-SPIEMKVTVPEGKTLEKDIVMN-EGVELQEVQV--KGAFQGQKKAINTQKNNLGIT 141

Query: 144 QAVSVKELSRKGVSDAEGAVTKVAGVSKQ-DGVKNVF--VRGLGDRYNATTFNGFAVPSE 200
             VS  ++ +   S+   A+ +++G++ Q D  +  F  VRG     ++ T NG  VPS 
Sbjct: 142 NVVSADQVGKFPDSNIGDALKRISGINVQYDQGEARFGQVRGTSADLSSVTINGNRVPSA 201

Query: 201 DPEYKNISLDFFGTDIIQSVGVNKAFNAGGISDVGGATIDIVSKE---------LIGSGN 251
           + + +N+ LD    D+IQ++ V+K        D  G +I++V+K            GSG 
Sbjct: 202 EGDTRNVQLDLIPADMIQTIEVSKVVTPDMDGDAIGGSINLVTKNSPYKRTINATAGSGY 261

Query: 252 LNIGLSGGLNTQTVTADFLKQDGVNLLGFATTTEPADENNWGFKNKLDPSKQSLQINRSY 311
             I     LN      D    D + +L  + + + A   ++  +   + ++        Y
Sbjct: 262 NWISEKAQLNLGFTYGDRFFNDRLGML-LSASYQNAPSGSYDTEFMWEQNEDGKVYVSDY 320

Query: 312 SISGGKRFHIGKDRNPLSFFLTAGHTTDYQFTDETIRNTTTS-----GTIYKDM-TGKKY 365
            +   +++ + ++R   S         +++ T + I N          T  KD+    K 
Sbjct: 321 QM---RQYFVTRERQSYSAAFDFDINENHKLTFKGIFNNRNDWENRYRTNIKDLDENGKG 377

Query: 366 TENISQLALA--NVDYDMQNRHHMSYNFMMIHANVQSVGDYTGKNSIFSDDYDNQGF--- 420
           T  I   A    N +  ++ +  M +     H       D+    +  +++  N+ +   
Sbjct: 378 TVRIQTKAGTPDNRNARLERQRTMDFALGGEHLWGAIGMDWNASYAKATEERPNERYLDF 437

Query: 421 -TRRQQANDNLLIVNQLMTNWGLTKTLSLDAGASYNIVKGNEPDRR-------------I 466
             ++Q+ + +L    Q +   G   TL+L    S   +   + D +             +
Sbjct: 438 QLKKQEFDMDLSDERQPLATPGTGSTLTLSDKFSLKELTEQQEDIKEEDMKFSANFKASL 497

Query: 467 NNITKAEEGYTLLRGNSQQRY----FSTLDEDDINVKAGLIYRLKDNVEEISNIRLGYTG 522
           NN  K + G  ++R   ++      ++  DED     A +   LK+ V++ S  +   + 
Sbjct: 498 NNGAKLKFGAKVVRKTKEKEIDFYEYTPKDED-----AFMTNSLKNTVDQ-STDKFMPSD 551

Query: 523 RFVDDNFKATEY--NLTVGHASSI--PSLDNFSLDDYYNQQNLSSGWFTV-QKNIDKYSV 577
           ++    F + EY   L +  AS      +     +++  ++ +SSG+     K     ++
Sbjct: 552 KYQVGTFASKEYVGGLNLNDASQFDKEQVQAELAENFEARETVSSGYVRFDHKFASDINL 611

Query: 578 AKNIHSAYAEATYQFTPRWIVNVGMKYDNVDIQVDYNVNKGGSEGSNTIQKDFFLPSLNL 637
              +   +    Y          G  YD+         +K    G  T     FLPS+ +
Sbjct: 612 MAGLRMEHTSLRY---------TGRNYDD-------ETDKTTKTGRMTNSYVNFLPSILV 655

Query: 638 KYNLSEKHSLRLGASKTYTLPQAKEISPYRYV--GVNFNSQGNANLKPSDNYNVDLKWDF 695
           K+++++   +R   ++T + P+   + P   +  G N    GN++LKP+ +YN DL  D+
Sbjct: 656 KWDVNDDFKIRGSYTQTLSRPKYSALVPSVNINRGDNEIKIGNSDLKPTISYNFDLSADY 715

Query: 696 NPTPTELISLTAFYKLIKNPISRIEVASAGGYLSYE-------NIADKATVAGVEVEVRK 748
                 L+S   FYK I + I   +V +   Y   E         A  A + G+E   ++
Sbjct: 716 YFKSVGLVSAGFFYKKIDDFIVD-QVLTNYEYQGTEYTRFTQPKNAGNANLWGLEFSYQR 774

Query: 749 NL-FVRPLSSAANGMNKLSFGLNGSYIYTNAKMPLATV-----TTGSQLEGAAPWIANFD 802
           +  F+ P             G  G+Y YT++++           +G  L G+    AN  
Sbjct: 775 DFGFIAPALKYV--------GFYGTYTYTHSRVEDFNFEGRENESGLSLPGSPEHTANAS 826

Query: 803 LSHNFTKGTHSFINTLVFNYVSDKIYTIGTQGYQDIMEQGMMTLDFVSQAKLNKYVSLTL 862
           L   F KG  +    L +N+ SD I  +G   + D     +  +D  +     K V +T 
Sbjct: 827 L--YFEKGGLNV--RLSYNFASDFIDEMGPSTFYDRYYDAVNYMDVNASYTFGKKVKMTF 882

Query: 863 --KARNLLNPSYQLSRKANESGEKVVLSDYKKGINISLGVSCTF 904
             +A NLLN   Q  R    + ++ + ++Y  G+ ++ G+  +F
Sbjct: 883 YAEANNLLN---QPLRYYQGTKDRTMQAEY-YGVRMNAGLKISF 922