Pairwise Alignments

Query, 264 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 304 a.a., AraC family transcriptional regulator from Cupriavidus basilensis FW507-4G11

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 52/244 (21%), Positives = 105/244 (43%), Gaps = 4/244 (1%)

Query: 18  VVYCFSGKAKLNVYDDSHWIQPQELIILLPGQFVSFTEASDDFLTTTLVVSPTMFSDALS 77
           V+Y   G  +  + DD  +      ++ +P + V     + D     + ++       L+
Sbjct: 49  VLYVHQGGGRA-LLDDREYPLGARTVVTVPPRCVHGFRFTPDVDGIVITMTDHYLHTLLA 107

Query: 78  GVPRFSPHFFFYMRTHYWYP--QTENDTRRLMNFFGMVKDKVTSNDIYRRELIIHLLRYL 135
           GVP   P F       +  P     +D   L     + + ++ +  ++R   +  LL  L
Sbjct: 108 GVPDALPLFERPYHDPFGDPAGSERDDATVLAGALELFRAEMNAVSLWRGAALSALLSLL 167

Query: 136 YLELFNAYEKEASLMTTRKDTRKEELANKFFGLIMKHFKENKDVAFYADKLCITSKYLTM 195
            + +       A     +   R      +F  L+   F+ ++D+A YA  L I+   L  
Sbjct: 168 LVGIARR-ACGAGATGAQPAGRTARHFQQFQQLVEARFRNHQDLAGYAGTLGISPTQLNR 226

Query: 196 VIKEVSGKSAKDWIVEYIVLEIKALLKNTNMNIQEIAVKTNFANQSSLGRFFRKHTGMSL 255
           + ++++G+SA   I   +++E +  L  ++++I++IA    FA+ +   RFF KH G + 
Sbjct: 227 ICQQLAGRSALQLIHSRLIVEAQRDLLYSDLDIKQIASTLGFADAAYFARFFAKHVGQTP 286

Query: 256 SQYR 259
           S +R
Sbjct: 287 SAFR 290