Pairwise Alignments

Query, 598 a.a., putative chloride channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 605 a.a., Chloride channel core (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  192 bits (488), Expect = 3e-53
 Identities = 151/548 (27%), Positives = 253/548 (46%), Gaps = 45/548 (8%)

Query: 69  YLVYPVIGI--FLAGWFVRNIVK---DDISHGVTKILYAISRRQGRIKRHNIWSSTIASA 123
           +++   +GI   + GW V+  +    D ++ G   ++ A    +G I+R       + S 
Sbjct: 84  WVIVAALGITGLVTGWLVQRFLPNSLDGMTDGTDAMIRAFHAEKGVIRRRAPLLKGLTSI 143

Query: 124 ITIGFGGSVGAEAPIVLTGSAIGSNLGSVFKMEHRTLMLLVGCGAAGAIAGIFKAPIAGL 183
            TI  GGS G E P+   G+ IGS L     +  R   +L+  GAAG +  +F+AP+ G 
Sbjct: 144 CTIAAGGSAGREGPVSQIGAGIGSWLSMRLGLSPRERRILMLAGAAGGLGAVFRAPLGGA 203

Query: 184 VFTLEVL-MIDLTMSSLLPLLISAVTAATVSYITTGTEAMF---KFNLDQAFELERIPYV 239
           +  +EVL   D    +LLP ++S+V + ++     GT  +F   +F+     EL   P+ 
Sbjct: 204 LTAIEVLYREDFESEALLPAVLSSVVSYSLFTFVFGTAPIFGIPRFSFTSVLEL---PWY 260

Query: 240 ILLGIFCGLISLYFTRAMNSIE-GVFGKLK---NPYQKLAFGGVMLSVLIFLFPPLYGEG 295
           +LL + C      + R    ++  VFGKL+         A GGV++ +   L+PP+  +G
Sbjct: 261 LLLSLACAATGWAYVRTFRVLKYSVFGKLRARVGIMWTTALGGVLMGLFGILYPPVLSDG 320

Query: 296 YDTIELLLNGTSAAEWDTVMNNSMFYGYGNLLQVYLMLIILLKVFASSATNGGGGCGGIF 355
           Y  IE  +                    G L  V ++ I+L K  A++ T G G  GG+F
Sbjct: 321 YGWIEQAI-------------------LGQLPVVTMVTILLGKTLATAVTLGSGMSGGMF 361

Query: 356 APSLYLGCIAGFVFSHFSNDFAFSAYLPEKNFALMGMAGVMSGVMHAPLTGVFLIAELTG 415
           AP+L++G + G V    +             + L+GMA   +G+ HAP+  + ++ ELT 
Sbjct: 362 APALFVGGMTGGVVGFAAQQVQPGVVTQPGGYVLVGMAAFFAGIAHAPIGPLVMVCELTQ 421

Query: 416 GYDLFLPLMIVSVSSYLTIIAFEPHSIYSMRLAKRGQLLTHHKDKAV--LTLMKMENVVE 473
           GY L  PLM+   SS + I+     ++Y  ++  + +   H +D  V  L  M++ +   
Sbjct: 422 GYGLLAPLML---SSAVCILLGRRTALYENQVENKFESPAHLQDATVNLLATMRVRDCYT 478

Query: 474 KDFVAVHPE-MDLGELVKAIAASHRNMFPVTDKKTGELLGIVLLDDIRNIMFRQELYHRF 532
           +  VAV  E + L  L   IA +    FPV     G L G++ + D+R I++  +L+   
Sbjct: 479 RGRVAVVEENVTLKALTDIIANTRAFTFPVRGMH-GRLNGLLAVQDVRGILYEADLFDLV 537

Query: 533 TVNKLMTSAPAKIFDTDGMEQVMQTFDDTKAWNLPVV--DEEGRYQGFVSKSKIFNSYRQ 590
               L     A + + D +   +  F +T    LPVV  D E    G + +S +F +Y  
Sbjct: 538 LAGDLARPLTA-LTEDDDLYTALLAFVETDLSQLPVVSKDNEEAVLGLLERSDLFRAYSD 596

Query: 591 VLVHFSED 598
            L    E+
Sbjct: 597 SLKALREE 604