Pairwise Alignments

Query, 598 a.a., putative chloride channel protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 562 a.a., Chloride channel core (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  158 bits (399), Expect = 7e-43
 Identities = 121/446 (27%), Positives = 212/446 (47%), Gaps = 43/446 (9%)

Query: 6   RQSLLQRCIKWREANIKEKQFILILSFLVGIFTAIAALFLKFLIHQIQNFLTNNFNATSA 65
           R +L +  +  R     + QF  I +  VGI    AAL  +  IH +Q     + +  + 
Sbjct: 17  RSALARASVTIRRQGPSQIQFWFI-ALAVGIAAGFAALIFRKGIHWLQTMAYGHEDVRAV 75

Query: 66  N--------YLYLVYPVIGIFLAGWFVRNIVKDDISHGVTKILYAISRRQGRIKRHNIWS 117
                    Y  ++ P +G  + G  +     D     V  ++   +  +GR+++    +
Sbjct: 76  IDHAAGLPWYWLVIVPTLGGLVVGLILHFFTDDGRVRSVADVIEGSALYEGRVEKRAGIA 135

Query: 118 STIASAITIGFGGSVGAEAPIVLTGSAIGSNLGSVFKMEHRTLMLLVGCGAAGAIAGIFK 177
           S +AS IT+  GGS G E P+V   + I S + +    +  T   L+GC  A A++  F 
Sbjct: 136 SAVASWITLSTGGSSGREGPVVHLAAVISSWVSNRIHADGITGRDLLGCAVAAAVSASFN 195

Query: 178 APIAGLVFTLEVLMIDLTMSSLLPLLISAVTAATVSYITTGTEAMFKFNLDQAFELE--- 234
           APIAG +F LEV++    + +  P++I++     ++ +  G   + +F+L +A  L    
Sbjct: 196 APIAGALFALEVVLRHFAVHAFAPIVIASAAGTVINRLEFGD--VTEFSLPEANALAFYV 253

Query: 235 RIPYVILLGIFCGLISLYFTRAM-------NSIEGVFGKLKNPYQKLAFGGVMLSVLIFL 287
            +P  +LLG+ CGL+++   +++       N ++ V G  +  Y + AF GV+L +L   
Sbjct: 254 ELPAFLLLGLVCGLVAIVLMKSVFWTEDFANHLQKVTGLPR--YLRPAFAGVLLGLLAIW 311

Query: 288 FPPLYGEGYDTIELLLNGTSAAEWDTVMNNSMFYGYGNLLQVYLMLIILLKVFASSATNG 347
           FP + G GY+T       T+A     +++ ++ +              +LKV A + T G
Sbjct: 312 FPHIIGVGYETT------TNALTSQLLLHEAIVFA-------------ILKVVAVAITIG 352

Query: 348 GGGCGGIFAPSLYLGCIAGFVFSHFSNDFAFSAYLPEKNFALMGMAGVMSGVMHAPLTGV 407
           G   GGIF+PSL +G + G  F   +          E  +AL GM  V + V+ AP++  
Sbjct: 353 GRMGGGIFSPSLMVGALTGLAFGMIATGVFPDVSGSEALYALAGMGAVAAAVLGAPISTT 412

Query: 408 FLIAELTGGYDLFLPLMI-VSVSSYL 432
            ++ ELTG +   L +M+ VS+S+ L
Sbjct: 413 LIVFELTGDWQTGLAVMVAVSLSTAL 438