Pairwise Alignments

Query, 320 a.a., TPR-domain containing protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 287 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 1/134 (0%)

Query: 167 LMRAEALLKMKQYKETMEDIDAVLAQNPEEETAILLRGKVKEANGQEEEAETDYKFVTEI 226
           L+ A+A L++ Q    +  ++     +P E   +   G  +   G   EA +  +    I
Sbjct: 80  LVLADASLRLNQLDPAIAALEKAQKLSPREPAILFALGSARFRQGNYSEAASFLQRGLAI 139

Query: 227 NPFNEQAYLYLGQLYINQKKLAEAIALFDEAIELNPNFAEAYKERGRAKLLNGDKDGSVE 286
            P +  A   LG +Y+ QK+   AIA F +A+++ P+F EA    G      GD++ ++ 
Sbjct: 140 KPDSSGALFDLGNVYLIQKQYPPAIAAFQKAVQVKPDFWEAINNLGLVSYEQGDRNQALN 199

Query: 287 DMKKSLELNPKDEA 300
              +++EL+ KD A
Sbjct: 200 YWNRAIELS-KDAA 212



 Score = 37.4 bits (85), Expect = 4e-07
 Identities = 33/157 (21%), Positives = 60/157 (38%)

Query: 60  DFETMGYLSQLYIPMGETEKARELLEKMAVMEPHVTSTFLTLANVCYIQEDYKAMEEAAG 119
           DF     L+   + + + + A   LEK   + P   +    L +  + Q +Y        
Sbjct: 75  DFRVWLVLADASLRLNQLDPAIAALEKAQKLSPREPAILFALGSARFRQGNYSEAASFLQ 134

Query: 120 KAIAIEEGNAVAHFLLGKARKGQDDEIMTIAHLTKAITLKDDFIEARLMRAEALLKMKQY 179
           + +AI+  ++ A F LG     Q      IA   KA+ +K DF EA         +    
Sbjct: 135 RGLAIKPDSSGALFDLGNVYLIQKQYPPAIAAFQKAVQVKPDFWEAINNLGLVSYEQGDR 194

Query: 180 KETMEDIDAVLAQNPEEETAILLRGKVKEANGQEEEA 216
            + +   +  +  + +    +L +  +    GQ EEA
Sbjct: 195 NQALNYWNRAIELSKDAAEPVLAKAVLVYQQGQTEEA 231



 Score = 32.3 bits (72), Expect = 1e-05
 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 10/120 (8%)

Query: 183 MEDIDAVLAQNPEEETAILLRGKVKEANGQEEEAETDYKFVTEINPFNEQAYLYLGQLYI 242
           +E+   VLAQ    E A LL+ +      Q E A+      T++ P + + +L L    +
Sbjct: 38  LEEQGLVLAQ----EAAQLLQFQ------QIEFAQRQAALATQLAPNDFRVWLVLADASL 87

Query: 243 NQKKLAEAIALFDEAIELNPNFAEAYKERGRAKLLNGDKDGSVEDMKKSLELNPKDEASL 302
              +L  AIA  ++A +L+P         G A+   G+   +   +++ L + P    +L
Sbjct: 88  RLNQLDPAIAALEKAQKLSPREPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSSGAL 147