Pairwise Alignments

Query, 393 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 391 a.a., ABC transporter permease from Ralstonia sp. UNC404CL21Col

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 79/382 (20%), Positives = 146/382 (38%), Gaps = 17/382 (4%)

Query: 9   VALWQVMQRECRRLVSRPLYLFCMVIAPLFCYLFFTTLMDSGLPQNLPAGVVDMDDSSTS 68
           V  W V+ +E  +L  R    F M+I      LF      +  P++L  GV+  D S  +
Sbjct: 11  VRWWSVVLKEFLQL-RRDRVTFAMMIGIPIMQLFLFGFAINADPKHLLTGVIAADQSEFT 69

Query: 69  RNIV---RNLDAFSQTGVVAHYSNVTDARIAVQEGKIYGFFYIPKGLSAEAQSQRQPKIS 125
           R+ +   RN D F  T  +    + T  R A+ +G++     IP   +       +P + 
Sbjct: 70  RSFLASMRNSDYFDLTTTLV---DETAGREALAKGQLQFVVSIPPDFTRRLVRGEKPSLL 126

Query: 126 FYTNYSYLIAGSLLFRDMKMMGELTAGS---AARSVLYAKGATEDQAMGFLQPIVIDTHP 182
              + +   A  L    +  + +         A S L         A G   P  +  H 
Sbjct: 127 VEADATDPAATGLAVASLSQLVQGVVNKDMKGALSPLAGGAGAGPSASGAAPPFDVRIHK 186

Query: 183 LNNPWLNYSVYLCNTLIPGVLMLLIFMVTVYSIGVEI---KDRTAREWLRMSNNSIYIAL 239
           L NP    + Y    +IPG++  ++ M  V   G+ +   ++R   E L  +       +
Sbjct: 187 LYNPE-GITQY---NIIPGLMGTILTMTMVMMTGLAMTRERERGTMENLLATPVHPLEVM 242

Query: 240 AGKLLPHTVVFFIMGIFYNVYLYGFLHFPCNSGIFPMIFATLCLVLASQCCGIVMIGTLP 299
            GK++P+  +  +      +  +   H P    ++ +  + L  ++AS   GI +     
Sbjct: 243 TGKIVPYIFIGLVQVTIILLMAFFVFHVPFVGSVWMVYVSALLFIVASLTVGITLSSLAQ 302

Query: 300 TLRLGLSFASLWGVISFSISGFSFPVMAMNPVLQALSNLFPLRHYFLIYVDQALNGYSMA 359
                      + + +  +SGF FP + M    Q + NL P+ ++  +     L G    
Sbjct: 303 NQLQATQLTFFYFLPNILLSGFMFPFVGMPKWAQVIGNLLPMTYFNRLTRGILLKGNGWF 362

Query: 360 YSWSNYMALLIFMMLPFFVVHR 381
             W +   L++F ++   V  R
Sbjct: 363 ELWPSIWPLMVFTVVVLGVALR 384