Pairwise Alignments

Query, 419 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 387 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 3/194 (1%)

Query: 23  REFQTTFRDQGVLIFFILVPLGYPLLYSFIYDNEVVREVPAVVVDDSHSSLSREYLRKVD 82
           R++     D+ +      VP+   +   +I+   + R++P  VVD SHS LSR+ +R+VD
Sbjct: 12  RQWTLLRHDKWLFSCLTWVPILLAVSIWWIFSQGIARDLPFGVVDFSHSQLSRQLIREVD 71

Query: 83  ATPDIQIVAYCADMEEAKQMLKNRLAYGIIYIPSDFSDNIAKGKQTQVSIYCDMSGLLYY 142
           AT  + +  + A ++EA Q +++   YG + IP+ F   I + +Q QV+ + +   +L  
Sbjct: 72  ATSTLLVSQHFASVDEASQAMRSNQIYGFMVIPAQFDKAIYRQEQPQVTTFYNSQMILVG 131

Query: 143 KSMLIANTAVSLDMNKDIKIARSGNT---TERQDEITGYPIEYEEISIFNPTAGFAAFLI 199
           K +  A        N  + + ++  T   T         P+  +   +FN    +A FL+
Sbjct: 132 KLVNSAVVQAQGTFNAQVDVMKNLATKTHTTLAAMGRSVPVRTQITPLFNQNTNYAQFLV 191

Query: 200 PAVLVLIIQQTLLL 213
            A++  + Q T+++
Sbjct: 192 SAIVPALWQITIVV 205