Pairwise Alignments

Query, 417 a.a., putative exodeoxyribonuclease VII large subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 511 a.a., exodeoxyribonuclease VII, large subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  116 bits (291), Expect = 1e-30
 Identities = 119/464 (25%), Positives = 187/464 (40%), Gaps = 77/464 (16%)

Query: 8   ELNALVRRSLEQCLPDEYWIQAELSDVRSNTTGHCYLEFVQKDPRSNNLVAKARGMIWSN 67
           EL   +R ++E   P   W++ ++S++    +GHCY     +D   N         +W  
Sbjct: 18  ELTRAIRAAVEGGFPF-VWVRGQVSNLSRPASGHCYFALKDEDAVLN--------CVWFR 68

Query: 68  IYRLLKPYFEETTGQLFASGIKV-LVKVTVQFHELY------------GYSLTVLDIDPA 114
             +    +F+  TG++F  G +  L +      EL             GY L V+++   
Sbjct: 69  GNQRDAEHFDPMTGEVFEDGPRPGLARTMANGQELLCAGRLTVYPPRGGYQL-VVEMAQD 127

Query: 115 YTLGDMARRRREILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNS 174
             LG +  +   +  +L E G     ++  +P  P+R+AVI++ + A   DF        
Sbjct: 128 AGLGRLHAQFEALKARLAERGYFDAARKRPLPRHPKRVAVITAPSGAAVRDFLRMADERG 187

Query: 175 GGFFFYTELFPALMQGNQVEESVLAALDRINDRVNEFDVVVIIRGGGATSDLSGFDTYLL 234
            G      + P  +QG++    + AAL  +  +     VVV+IRGGG+  DL  F+   +
Sbjct: 188 WGCEI--RIHPVPVQGDEAPPRIAAALAEVVAQ-GWAQVVVLIRGGGSLEDLWAFNDERV 244

Query: 235 AAACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARL 294
           A A    PLPV+ GIGHE D T+ D  A  R  TPT AA+LL     E A  ++EL   L
Sbjct: 245 ATAVFGSPLPVLAGIGHEVDHTMADMTADVRAATPTHAAQLLWPERRELAQRVDELEMAL 304

Query: 295 QQG---AYALLEQE-------------------------------GRRLEMIQTRIPNLV 320
            +G    +A L+++                               GR  EM+  R  +  
Sbjct: 305 TRGMERRFARLDEQLGALARGLAWLSPERALARLDERFADAAARLGRAWEMLARR--DAA 362

Query: 321 HRKLTDARF--------------ALLAAGKDLAQATQTLLSRHRHRLELLRQRVADASPD 366
                DA                A+ A    L  A +  ++   H LE    R+    P 
Sbjct: 363 RLDAADAALTRTLGPEAWERRERAVDALEARLRWAGERAVTGREHELERCALRLDALDPL 422

Query: 367 KLLSRGYSITLK-DGKAVTDAASLNPGDQLVTRLAKGSFTSEVR 409
           + L RGYS+  + DG  +   A +  GD L   +  G     VR
Sbjct: 423 RPLERGYSLVRRADGGFLRSVAEVASGDALAVLVRDGEVDVTVR 466